Click here to switch to the map view.

The map label for this gene is 52786825

Identifier: 52786825

GI number: 52786825

Start: 2984079

End: 2984291

Strand: Reverse

Name: 52786825

Synonym: BLi03099

Alternate gene names: NA

Gene position: 2984291-2984079 (Counterclockwise)

Preceding gene: 52786826

Following gene: 52786824

Centisome position: 70.67

GC content: 42.25

Gene sequence:

>213_bases
ATGGCTCAAAACAACAGACAAAGCAGTTCTAACCAACTATTGGTTCCTGGTGCTGCTCAAGCTATCGACCAAATGAAATT
CGAAATCGCTTCTGAATTTGGCGTTAACCTTGGAGCAGAAACTACTTCTCGTGCAAACGGTTCAGTTGGAGGAGAAATCA
CTAAGCGTTTAGTTTCTTTCGCTCAACAGCAAATGGGTGGAACACAACAATAA

Upstream 100 bases:

>100_bases
ATCAAACATCTTTGTCTGTTTTTGCATACAATTACCAAACATTCTTTGTATGAAGTCATGTGTTTTTACACAATCTATAC
TCACAAGGAGGTGAGAACAC

Downstream 100 bases:

>100_bases
TTAAAATTAAAAAGCAATGGATAATGGGTGGGGTTTAATCCCCACTCTTTTTTATGTTCTGCAAAATAGGCATTTCGGAA
TACAATTGTATGAAAGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: SASP-1 [H]

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MAQNNRQSSSNQLLVPGAAQAIDQMKFEIASEFGVNLGAETTSRANGSVGGEITKRLVSFAQQQMGGTQQ

Sequences:

>Translated_70_residues
MAQNNRQSSSNQLLVPGAAQAIDQMKFEIASEFGVNLGAETTSRANGSVGGEITKRLVSFAQQQMGGTQQ
>Mature_69_residues
AQNNRQSSSNQLLVPGAAQAIDQMKFEIASEFGVNLGAETTSRANGSVGGEITKRLVSFAQQQMGGTQQ

Specific function: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to U

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alpha/beta-type SASP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001448
- InterPro:   IPR018126 [H]

Pfam domain/function: PF00269 SASP [H]

EC number: NA

Molecular weight: Translated: 7386; Mature: 7255

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00304 SASP_1 ; PS00684 SASP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQNNRQSSSNQLLVPGAAQAIDQMKFEIASEFGVNLGAETTSRANGSVGGEITKRLVSF
CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
AQQQMGGTQQ
HHHHCCCCCC
>Mature Secondary Structure 
AQNNRQSSSNQLLVPGAAQAIDQMKFEIASEFGVNLGAETTSRANGSVGGEITKRLVSF
CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
AQQQMGGTQQ
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA