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The map label for this gene is ytqI [H]

Identifier: 52786804

GI number: 52786804

Start: 2963701

End: 2964645

Strand: Reverse

Name: ytqI [H]

Synonym: BLi03076

Alternate gene names: 52786804

Gene position: 2964645-2963701 (Counterclockwise)

Preceding gene: 52786806

Following gene: 52786800

Centisome position: 70.21

GC content: 46.77

Gene sequence:

>945_bases
ATGAAAAAAGAAATCATCAGAACCATATCATTATATGACACGATCATTATACATAGACATGTGAGACCGGATCCTGACGC
CTACGGATCCCAATGCGGCCTTACGGAAATCCTGAGGGCAACCTACCCCGAAAAAAATATTTTCGCGGTCGGAGCTCCTG
AACCTTCTCTCGCTTTTTTGTATACTCCAGATGTGATTGAAGACCCGGTGTATGAAAATGCACTTGTCATCGTTTGCGAC
ACGGCAAATCAAGCGAGAATTTCAGATTCGCGCTACAACCTGGGCGACAAGCTGATCAAAATCGACCACCATCCGAATGA
AGACCGGTACGGCGACCTTTTATGGGTGGATACGAGTGCGAGCTCGACGAGCGAGATGATTTACGAACTGTATTTAGCGG
GTAAAGAACAAGCGGGATGGGCGCTTCCAACAAAGGGCGCCGAACTGATCTATGCCGGCATTGTGGGGGATACAGGGCGC
TTCTTATTTCCGAACACGACAAAAAAGACATTGAAATATGCCGGAGAGCTGATCGAGTATCCTTTTTCTTCCCAGGCGCT
TTTTGATCAATTATATGAGACGAAATTAAATGTTGTGAGGCTGAATGGCTATATTTACCAGAATGTTTCTCTGTCCGAAA
ACGGTGTTGCGTCGGTTTTCATCACCCGCGATATTTTACATCAATACAATATTACGCCGTCTGAAGCTTCACAGCTTGTC
AGCACGCTCGGCAATATTTCGGGGATCAAAGCATGGGTGTTTTTTGTGGAGGAAGCCGATCAAATCAGGGTAAGGCTTCG
TTCAAAGGGGCCGATTGTCAATGAAGTCGCTAAAAAATACAACGGCGGGGGCCATCCGCTCGCAGCCGGCGCTTCCATCT
ATGACTGGAAAGACGCTGATCTTGTCATCGCTGACCTGGAGCGTATATGCAAAGAAAACAAATAA

Upstream 100 bases:

>100_bases
ATCGGGTTCGCTTTCTACAATAAAAAGTCATAACTTTCACTTTCCACCAACAACAGATTATGATTTAATGGTTAAAAACA
AAGTAAAGAAGGGGCGCGTC

Downstream 100 bases:

>100_bases
GAGGGGAAGTCCCTCTTTTTTGTGCAGTTTAACTGCAAACGCTTGCATTGCATCTTGCAAAAAAGTAAACAGCAGCAAAG
TGTAAGCGGATCATTTTACG

Product: YtqI

Products: NA

Alternate protein names: 3'(2'),5'-bisphosphate nucleotidase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; nanoRNAse [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKKEIIRTISLYDTIIIHRHVRPDPDAYGSQCGLTEILRATYPEKNIFAVGAPEPSLAFLYTPDVIEDPVYENALVIVCD
TANQARISDSRYNLGDKLIKIDHHPNEDRYGDLLWVDTSASSTSEMIYELYLAGKEQAGWALPTKGAELIYAGIVGDTGR
FLFPNTTKKTLKYAGELIEYPFSSQALFDQLYETKLNVVRLNGYIYQNVSLSENGVASVFITRDILHQYNITPSEASQLV
STLGNISGIKAWVFFVEEADQIRVRLRSKGPIVNEVAKKYNGGGHPLAAGASIYDWKDADLVIADLERICKENK

Sequences:

>Translated_314_residues
MKKEIIRTISLYDTIIIHRHVRPDPDAYGSQCGLTEILRATYPEKNIFAVGAPEPSLAFLYTPDVIEDPVYENALVIVCD
TANQARISDSRYNLGDKLIKIDHHPNEDRYGDLLWVDTSASSTSEMIYELYLAGKEQAGWALPTKGAELIYAGIVGDTGR
FLFPNTTKKTLKYAGELIEYPFSSQALFDQLYETKLNVVRLNGYIYQNVSLSENGVASVFITRDILHQYNITPSEASQLV
STLGNISGIKAWVFFVEEADQIRVRLRSKGPIVNEVAKKYNGGGHPLAAGASIYDWKDADLVIADLERICKENK
>Mature_314_residues
MKKEIIRTISLYDTIIIHRHVRPDPDAYGSQCGLTEILRATYPEKNIFAVGAPEPSLAFLYTPDVIEDPVYENALVIVCD
TANQARISDSRYNLGDKLIKIDHHPNEDRYGDLLWVDTSASSTSEMIYELYLAGKEQAGWALPTKGAELIYAGIVGDTGR
FLFPNTTKKTLKYAGELIEYPFSSQALFDQLYETKLNVVRLNGYIYQNVSLSENGVASVFITRDILHQYNITPSEASQLV
STLGNISGIKAWVFFVEEADQIRVRLRSKGPIVNEVAKKYNGGGHPLAAGASIYDWKDADLVIADLERICKENK

Specific function: Bifunctional enzyme which has both oligoribonuclease and pAp-phosphatase activities. Degrades RNA oligonucleotides with a length of 5 nucleotides and shorter. Converts 3'(2')- phosphoadenosine 5'-phosphate (PAP) to AMP [H]

COG id: COG0618

COG function: function code R; Exopolyphosphatase-related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: =3.1.3.7 [H]

Molecular weight: Translated: 35090; Mature: 35090

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEIIRTISLYDTIIIHRHVRPDPDAYGSQCGLTEILRATYPEKNIFAVGAPEPSLAFL
CCHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEE
YTPDVIEDPVYENALVIVCDTANQARISDSRYNLGDKLIKIDHHPNEDRYGDLLWVDTSA
ECCHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCC
SSTSEMIYELYLAGKEQAGWALPTKGAELIYAGIVGDTGRFLFPNTTKKTLKYAGELIEY
CCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEECCCCHHHHHHHHHHHHCC
PFSSQALFDQLYETKLNVVRLNGYIYQNVSLSENGVASVFITRDILHQYNITPSEASQLV
CCCHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCEEEEEEHHHHHHCCCCHHHHHHHH
STLGNISGIKAWVFFVEEADQIRVRLRSKGPIVNEVAKKYNGGGHPLAAGASIYDWKDAD
HHHHCCCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCEECCCEEECCCCCC
LVIADLERICKENK
EEHHHHHHHHHCCC
>Mature Secondary Structure
MKKEIIRTISLYDTIIIHRHVRPDPDAYGSQCGLTEILRATYPEKNIFAVGAPEPSLAFL
CCHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEE
YTPDVIEDPVYENALVIVCDTANQARISDSRYNLGDKLIKIDHHPNEDRYGDLLWVDTSA
ECCHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCC
SSTSEMIYELYLAGKEQAGWALPTKGAELIYAGIVGDTGRFLFPNTTKKTLKYAGELIEY
CCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEECCCCHHHHHHHHHHHHCC
PFSSQALFDQLYETKLNVVRLNGYIYQNVSLSENGVASVFITRDILHQYNITPSEASQLV
CCCHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCEEEEEEHHHHHHCCCCHHHHHHHH
STLGNISGIKAWVFFVEEADQIRVRLRSKGPIVNEVAKKYNGGGHPLAAGASIYDWKDAD
HHHHCCCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCEECCCEEECCCCCC
LVIADLERICKENK
EEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]