Click here to switch to the map view.

The map label for this gene is ysxD [H]

Identifier: 52786680

GI number: 52786680

Start: 2833081

End: 2833566

Strand: Direct

Name: ysxD [H]

Synonym: BLi02948

Alternate gene names: 52786680

Gene position: 2833081-2833566 (Clockwise)

Preceding gene: 52786671

Following gene: 52786695

Centisome position: 67.09

GC content: 47.12

Gene sequence:

>486_bases
TTGAAAAAGAAATCTGTTTTGCTTCCATTGCTGTTGATAGCCGTTGCTGTCTACGCCTTTTTGCGGTCGGGCCGGATCAG
CCTGTTTGACGGCCAGGAAGAATGGTCTGTACTTGCAGGTCTCGTCGGACTGGCTCTTTTTTATCAGGGACAGAAGGAAG
CCGATTCCGCCCATTCCTTTGCAGGGCTCTTAATGACAGCGATCGGCGTTTATTTCACATTTAAAGAGGACTATTTCAGC
CGCGCGGATGATTTTGCGGTCATCGTGCTGATCTTCGGTGCGGCGCTGCTTGTCAAATCGTTTAAGACAAAAGAATATCA
ATATGAAAGTCTGCTGATGATCGCGGTCGCCCTCTATCTTTACTTTTTCCGGCAAATTGCCGCCTGGCTGAAGTCGGTGA
ATATCGAGACGGCATATGTAGAAGCTTATTGGCCGGCCGCTTTTATCGCGGTTAGTCTGCTCTTATTATTCTTAAAAAGA
AAATAG

Upstream 100 bases:

>100_bases
CTATTTTCTCTTCCCAAAATGTGAACAGATTTTAAAAAATTGATGTGATATAGTAGAAAATGTGTTTCTATTTCTTTCAC
TACATCAAGAAGGTGATACT

Downstream 100 bases:

>100_bases
TTTATTCAAGAAAAAGCACTTGCATCAATCCCGCAAGTGCTTTTTCTTTTATCTCGCGATCATTTGCTCGATCGCCGACC
ATGCTTCTTGTTTACCCTTT

Product: YsxD

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKKKSVLLPLLLIAVAVYAFLRSGRISLFDGQEEWSVLAGLVGLALFYQGQKEADSAHSFAGLLMTAIGVYFTFKEDYFS
RADDFAVIVLIFGAALLVKSFKTKEYQYESLLMIAVALYLYFFRQIAAWLKSVNIETAYVEAYWPAAFIAVSLLLLFLKR
K

Sequences:

>Translated_161_residues
MKKKSVLLPLLLIAVAVYAFLRSGRISLFDGQEEWSVLAGLVGLALFYQGQKEADSAHSFAGLLMTAIGVYFTFKEDYFS
RADDFAVIVLIFGAALLVKSFKTKEYQYESLLMIAVALYLYFFRQIAAWLKSVNIETAYVEAYWPAAFIAVSLLLLFLKR
K
>Mature_161_residues
MKKKSVLLPLLLIAVAVYAFLRSGRISLFDGQEEWSVLAGLVGLALFYQGQKEADSAHSFAGLLMTAIGVYFTFKEDYFS
RADDFAVIVLIFGAALLVKSFKTKEYQYESLLMIAVALYLYFFRQIAAWLKSVNIETAYVEAYWPAAFIAVSLLLLFLKR
K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18180; Mature: 18180

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKSVLLPLLLIAVAVYAFLRSGRISLFDGQEEWSVLAGLVGLALFYQGQKEADSAHSF
CCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AGLLMTAIGVYFTFKEDYFSRADDFAVIVLIFGAALLVKSFKTKEYQYESLLMIAVALYL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFFRQIAAWLKSVNIETAYVEAYWPAAFIAVSLLLLFLKRK
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKKSVLLPLLLIAVAVYAFLRSGRISLFDGQEEWSVLAGLVGLALFYQGQKEADSAHSF
CCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AGLLMTAIGVYFTFKEDYFSRADDFAVIVLIFGAALLVKSFKTKEYQYESLLMIAVALYL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFFRQIAAWLKSVNIETAYVEAYWPAAFIAVSLLLLFLKRK
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7961402; 8969504; 9384377 [H]