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The map label for this gene is yrkD [H]

Identifier: 52786530

GI number: 52786530

Start: 2682954

End: 2683214

Strand: Reverse

Name: yrkD [H]

Synonym: BLi02795

Alternate gene names: 52786530

Gene position: 2683214-2682954 (Counterclockwise)

Preceding gene: 52786531

Following gene: 52786529

Centisome position: 63.54

GC content: 39.46

Gene sequence:

>261_bases
ATGGAATACGATGATCAATTAAAAAATAGGATCAAACGAGTTGAAGGTCAAGTTCGAGGGATATTAAAGATGATGGATGA
AGGAAAAGAGTGTAAAGAACTCGTAAGCCAAATGTCAGCTGTTCGTTCTGCATTAGATCGGGCCATCGGTGTTGTTGTAA
GCAGTAACTTGGAGAAATGCGTCCGCCTTCAAATTGAAAGAGGAGAAGATACCGAAGACCTCATCCAAGAAGCCGTTAAT
TTATTGGTTAAAAGCAGATAA

Upstream 100 bases:

>100_bases
GAATGTGACAGAAATGCAGGACAGTTCATATCTGCGTAGTAACGGTTTGCGGAAAAGTTGAAGGATATGTCATCATCATA
AGGAAATAGGAGGTTATGTG

Downstream 100 bases:

>100_bases
TGTTTAGATGGCTGTTGTTTATGATACAGCCTCTATATACCCCTGGTTAAAAGAAATTTTGCTGTTTTTATACCCTTTAG
GGTATAAAAAGCTGACTTAT

Product: YrkD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MEYDDQLKNRIKRVEGQVRGILKMMDEGKECKELVSQMSAVRSALDRAIGVVVSSNLEKCVRLQIERGEDTEDLIQEAVN
LLVKSR

Sequences:

>Translated_86_residues
MEYDDQLKNRIKRVEGQVRGILKMMDEGKECKELVSQMSAVRSALDRAIGVVVSSNLEKCVRLQIERGEDTEDLIQEAVN
LLVKSR
>Mature_86_residues
MEYDDQLKNRIKRVEGQVRGILKMMDEGKECKELVSQMSAVRSALDRAIGVVVSSNLEKCVRLQIERGEDTEDLIQEAVN
LLVKSR

Specific function: Unknown

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 9793; Mature: 9793

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYDDQLKNRIKRVEGQVRGILKMMDEGKECKELVSQMSAVRSALDRAIGVVVSSNLEKC
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRLQIERGEDTEDLIQEAVNLLVKSR
HHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEYDDQLKNRIKRVEGQVRGILKMMDEGKECKELVSQMSAVRSALDRAIGVVVSSNLEKC
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRLQIERGEDTEDLIQEAVNLLVKSR
HHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]