Click here to switch to the map view.

The map label for this gene is ydfQ [H]

Identifier: 52786524

GI number: 52786524

Start: 2678946

End: 2679281

Strand: Reverse

Name: ydfQ [H]

Synonym: BLi02789

Alternate gene names: 52786524

Gene position: 2679281-2678946 (Counterclockwise)

Preceding gene: 52786525

Following gene: 52786523

Centisome position: 63.45

GC content: 38.99

Gene sequence:

>336_bases
ATGAAAGAAGCTGCAGAACTAACTTCAATGGTGTCAATTGAGAAATTTATAACTGATCATCAATTAAGTTTTATATATAT
ATCAAGACCTCAATGCACAGTCTGTCACGCTGTTCTGCCTCAGCTTAGAGCACTGTTGGCCCGCTTTCCAAAGATCAAAT
TAGGACATATAAATGCTGACATAGTGGAAGAGGTTGCCGGCAGGTTTTCAGTCTTCACAGTTCCTGTGCTTCTTTTGTTT
ATTGAGGGAACCGAATGTCTACGAGAAGCGCGTTTTATTCATTTTGAACAGCTTGAACAGAAGTTAAAAAGAGTCTATCA
GTTGTACGAGGAATAG

Upstream 100 bases:

>100_bases
TAAAGTTCTTCAAGGTATTTTGATATTCGTTATTTTTCTTACAACAGTGAAAATTTGGGTTGATATCTTACTGTATTGAC
CGTCTTGAAGGAGGAATTGG

Downstream 100 bases:

>100_bases
ATAGCTAAGGGAGGGTCCATGATGTGTCAAAACCCGGCTCGGTATACAGAAGAAGGAATGTCAAATGAAAGCGGCTATTT
AAGGCAGATCTTCGACCATT

Product: YdfQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MKEAAELTSMVSIEKFITDHQLSFIYISRPQCTVCHAVLPQLRALLARFPKIKLGHINADIVEEVAGRFSVFTVPVLLLF
IEGTECLREARFIHFEQLEQKLKRVYQLYEE

Sequences:

>Translated_111_residues
MKEAAELTSMVSIEKFITDHQLSFIYISRPQCTVCHAVLPQLRALLARFPKIKLGHINADIVEEVAGRFSVFTVPVLLLF
IEGTECLREARFIHFEQLEQKLKRVYQLYEE
>Mature_111_residues
MKEAAELTSMVSIEKFITDHQLSFIYISRPQCTVCHAVLPQLRALLARFPKIKLGHINADIVEEVAGRFSVFTVPVLLLF
IEGTECLREARFIHFEQLEQKLKRVYQLYEE

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 12894; Mature: 12894

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEAAELTSMVSIEKFITDHQLSFIYISRPQCTVCHAVLPQLRALLARFPKIKLGHINAD
CCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEECCCCHH
IVEEVAGRFSVFTVPVLLLFIEGTECLREARFIHFEQLEQKLKRVYQLYEE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKEAAELTSMVSIEKFITDHQLSFIYISRPQCTVCHAVLPQLRALLARFPKIKLGHINAD
CCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEECCCCHH
IVEEVAGRFSVFTVPVLLLFIEGTECLREARFIHFEQLEQKLKRVYQLYEE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]