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The map label for this gene is yjgF [C]

Identifier: 52786515

GI number: 52786515

Start: 2670644

End: 2671027

Strand: Reverse

Name: yjgF [C]

Synonym: BLi02780

Alternate gene names: 52786515

Gene position: 2671027-2670644 (Counterclockwise)

Preceding gene: 52786516

Following gene: 52786514

Centisome position: 63.25

GC content: 39.06

Gene sequence:

>384_bases
GTGAACAAAGTGGAGAGTATTTTTGAGGCAGGGAATTTAAAATCGAACGGTCATTATGCCTTAGCTGTGATTCATCAAAA
CACGGTCTATGTATCAGGGCAATTTGCCATTGATCCAATCACGCAGGAAAAGAAATTTGGCACCATTGAAGAAGAGACTT
TGCAGGTATTGTCAAATATAGAGTATATCTTAAAAAAAGCCGGCAGTCATAAAGGAAAAATTTTAAAGATAACCTTATAT
CTTCACGATATCAATTTGTTAGACCGTGTTGACAATGTCTGTCAGGGTTTTTTTCACGATTATCGCCCAGCACGGTCAGT
TGTTTCGACGACCGAGCTGCATTACGGTTTTCAGGTTGAAATTGAAGCAATCGCCAGTCTGTAA

Upstream 100 bases:

>100_bases
TCCTCATGAAAGGTGCGGTTGATAAAGTGGCAGAACAATTAGGCATTTCAAAGGTAACTGTCTACAGCTATTTAGATGAA
GTAAAAAAAAGACAATCGGA

Downstream 100 bases:

>100_bases
TATATTTTTTTGTCTAAAACATATAAAAAAATATATAAAATATAAAAAAATATATAATAGGAGGGTCTAAAAATAATGGA
ACAGTATCAATGTCATTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MNKVESIFEAGNLKSNGHYALAVIHQNTVYVSGQFAIDPITQEKKFGTIEEETLQVLSNIEYILKKAGSHKGKILKITLY
LHDINLLDRVDNVCQGFFHDYRPARSVVSTTELHYGFQVEIEAIASL

Sequences:

>Translated_127_residues
MNKVESIFEAGNLKSNGHYALAVIHQNTVYVSGQFAIDPITQEKKFGTIEEETLQVLSNIEYILKKAGSHKGKILKITLY
LHDINLLDRVDNVCQGFFHDYRPARSVVSTTELHYGFQVEIEAIASL
>Mature_127_residues
MNKVESIFEAGNLKSNGHYALAVIHQNTVYVSGQFAIDPITQEKKFGTIEEETLQVLSNIEYILKKAGSHKGKILKITLY
LHDINLLDRVDNVCQGFFHDYRPARSVVSTTELHYGFQVEIEAIASL

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=109, Percent_Identity=36.697247706422, Blast_Score=77, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71982068, Length=109, Percent_Identity=38.5321100917431, Blast_Score=72, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI71982075, Length=109, Percent_Identity=38.5321100917431, Blast_Score=72, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI25148896, Length=109, Percent_Identity=38.5321100917431, Blast_Score=72, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6320899, Length=103, Percent_Identity=33.0097087378641, Blast_Score=69, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6322138, Length=109, Percent_Identity=33.0275229357798, Blast_Score=64, Evalue=1e-11,
Organism=Drosophila melanogaster, GI19921376, Length=119, Percent_Identity=36.1344537815126, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14325; Mature: 14325

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVESIFEAGNLKSNGHYALAVIHQNTVYVSGQFAIDPITQEKKFGTIEEETLQVLSNI
CCHHHHHHHCCCCCCCCCEEEEEEECCEEEEECEEEECCCCCCCCCCCCHHHHHHHHHHH
EYILKKAGSHKGKILKITLYLHDINLLDRVDNVCQGFFHDYRPARSVVSTTELHYGFQVE
HHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEE
IEAIASL
EEEEECC
>Mature Secondary Structure
MNKVESIFEAGNLKSNGHYALAVIHQNTVYVSGQFAIDPITQEKKFGTIEEETLQVLSNI
CCHHHHHHHCCCCCCCCCEEEEEEECCEEEEECEEEECCCCCCCCCCCCHHHHHHHHHHH
EYILKKAGSHKGKILKITLYLHDINLLDRVDNVCQGFFHDYRPARSVVSTTELHYGFQVE
HHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEE
IEAIASL
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]