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The map label for this gene is yqfD [H]

Identifier: 52786461

GI number: 52786461

Start: 2622708

End: 2623904

Strand: Reverse

Name: yqfD [H]

Synonym: BLi02726

Alternate gene names: 52786461

Gene position: 2623904-2622708 (Counterclockwise)

Preceding gene: 52786462

Following gene: 52786460

Centisome position: 62.14

GC content: 42.94

Gene sequence:

>1197_bases
GTGAAGAATAAATGGCTTTCTTTTTTTTCAGGAAAGATCCAGCTTAAGATAACGGGAAAAGGGATCGAACGGTTATTAAA
TGAATGCACCAGGCGCAACATCCCGATGTTTAATGTAAAGAAAAAGAAAGACGCCGTCTTTCTTTATATTCCGCTTTCTG
ATGTACATGCCTTCCGGAAGGTCATCAGAGGCTTCGACTGCAAGTGCAGGTTCATCAAACGAAAAGGGTTTCCTTTCCTC
GTGCAGAAGTCTAAACGGAATAGCGGCTTCACTTTTGGAGTTGCTGCATTTTTTATCATCATGTTCCTATTGTCCAACAT
GCTTTGGAAAATTGATATTACAGGAGCCAATCCAGAGACAGAACATCAAATCAGACAGCAATTGGATCAAATCGGCGTCA
AAAAAGGCCGCTTTCAGTTTTCAATGCTGACCCCGGAAAAAATTCAGCAGGCGCTCACAAAGCGGGTCGAAAACATCACT
TGGGTGGGCATTGAGTTAAACGGTACCGCCCTTCACATGAAAGTCGTTGAAAAGAATGAACCTGACAAAGAAAAATATAT
CGGTCCGAGGCACATCGTCGCCAAAAAAGGGGCGACCATCTCGAAAATGTTCGTGGAAAAAGGCGAGCCGCTCGTCACGG
TGAACCAGCACGTTGAAAAAGGGCAAATGCTCGTTTCCGGGCTGATCGGAAGCGAAGAGGAAAAGCAAAAAGTCGGAGCA
AAAGGGAAAATCTATGGTGAAACCTGGTACAAGTCAACAGTAACGGTTCCTCTTGAGACATCATTTGACGTTTTTACGGG
TAAAGTAAGGACAAGTCACAAGCTATCCCTCGGATCATTTTCCGTGCCGATCTGGGGCTTTTCATTTAAAAAAGAAGACT
TCTCGCGCCCGAAGACGGAGACCGAAAAACACTCGCTGCATTTTATGAATTTTAAGCTTCCTGTCGCTTATGAAAAGGAG
CATATGAGGGAGAGCGAACAAATCAAAAGGGTGTACTCGAAAAAAGAAGCAGTTCTTGAAGGAATCGAAATGGGAAAAAG
AGACATCAGGAAAAAAATCGGCAGAGACGGGAACATTATCAGTGAAAAAGTTTTGCACGAAACGAGCGAGAATGGTAAAG
TTAAATTGATCATCCTTTACCAGGTTATTGAAAACATTGTTCAAACAACACCAATTGTTCAGGAGACTAAAGAATGA

Upstream 100 bases:

>100_bases
AAGACTTTGTCATCAAAACGATTTTGCCTGAGGAAATTCTGCTTGAAGGCACGATTGAGCTTGTCCGCTATATCGATTCA
TAAGTCGGGGGGAAAGAAGC

Downstream 100 bases:

>100_bases
CAGAACACTTACTTGCGATTCATCAGCAACTGGAAAGTCCGAATGAGGCTCAAGCGCTGTTTGGGAACCAGGATTCCCAT
TTGAAGTTGATGGAGGAAGA

Product: YqfD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MKNKWLSFFSGKIQLKITGKGIERLLNECTRRNIPMFNVKKKKDAVFLYIPLSDVHAFRKVIRGFDCKCRFIKRKGFPFL
VQKSKRNSGFTFGVAAFFIIMFLLSNMLWKIDITGANPETEHQIRQQLDQIGVKKGRFQFSMLTPEKIQQALTKRVENIT
WVGIELNGTALHMKVVEKNEPDKEKYIGPRHIVAKKGATISKMFVEKGEPLVTVNQHVEKGQMLVSGLIGSEEEKQKVGA
KGKIYGETWYKSTVTVPLETSFDVFTGKVRTSHKLSLGSFSVPIWGFSFKKEDFSRPKTETEKHSLHFMNFKLPVAYEKE
HMRESEQIKRVYSKKEAVLEGIEMGKRDIRKKIGRDGNIISEKVLHETSENGKVKLIILYQVIENIVQTTPIVQETKE

Sequences:

>Translated_398_residues
MKNKWLSFFSGKIQLKITGKGIERLLNECTRRNIPMFNVKKKKDAVFLYIPLSDVHAFRKVIRGFDCKCRFIKRKGFPFL
VQKSKRNSGFTFGVAAFFIIMFLLSNMLWKIDITGANPETEHQIRQQLDQIGVKKGRFQFSMLTPEKIQQALTKRVENIT
WVGIELNGTALHMKVVEKNEPDKEKYIGPRHIVAKKGATISKMFVEKGEPLVTVNQHVEKGQMLVSGLIGSEEEKQKVGA
KGKIYGETWYKSTVTVPLETSFDVFTGKVRTSHKLSLGSFSVPIWGFSFKKEDFSRPKTETEKHSLHFMNFKLPVAYEKE
HMRESEQIKRVYSKKEAVLEGIEMGKRDIRKKIGRDGNIISEKVLHETSENGKVKLIILYQVIENIVQTTPIVQETKE
>Mature_398_residues
MKNKWLSFFSGKIQLKITGKGIERLLNECTRRNIPMFNVKKKKDAVFLYIPLSDVHAFRKVIRGFDCKCRFIKRKGFPFL
VQKSKRNSGFTFGVAAFFIIMFLLSNMLWKIDITGANPETEHQIRQQLDQIGVKKGRFQFSMLTPEKIQQALTKRVENIT
WVGIELNGTALHMKVVEKNEPDKEKYIGPRHIVAKKGATISKMFVEKGEPLVTVNQHVEKGQMLVSGLIGSEEEKQKVGA
KGKIYGETWYKSTVTVPLETSFDVFTGKVRTSHKLSLGSFSVPIWGFSFKKEDFSRPKTETEKHSLHFMNFKLPVAYEKE
HMRESEQIKRVYSKKEAVLEGIEMGKRDIRKKIGRDGNIISEKVLHETSENGKVKLIILYQVIENIVQTTPIVQETKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.megaterium spoIV [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010690 [H]

Pfam domain/function: PF06898 YqfD [H]

EC number: NA

Molecular weight: Translated: 45791; Mature: 45791

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKWLSFFSGKIQLKITGKGIERLLNECTRRNIPMFNVKKKKDAVFLYIPLSDVHAFRK
CCCCCEEEECCEEEEEEECHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEHHHHHHHHH
VIRGFDCKCRFIKRKGFPFLVQKSKRNSGFTFGVAAFFIIMFLLSNMLWKIDITGANPET
HHCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCH
EHQIRQQLDQIGVKKGRFQFSMLTPEKIQQALTKRVENITWVGIELNGTALHMKVVEKNE
HHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCEEEEEEEECCCEEEEEEECCCC
PDKEKYIGPRHIVAKKGATISKMFVEKGEPLVTVNQHVEKGQMLVSGLIGSEEEKQKVGA
CCHHHCCCCHHEEECCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHCCC
KGKIYGETWYKSTVTVPLETSFDVFTGKVRTSHKLSLGSFSVPIWGFSFKKEDFSRPKTE
CCEEEECEEECEEEEEEECCCCCEEECCCCCCCEEECCCEECEEECCCCCHHHCCCCCCC
TEKHSLHFMNFKLPVAYEKEHMRESEQIKRVYSKKEAVLEGIEMGKRDIRKKIGRDGNII
CCCCCEEEEEEEECCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHH
SEKVLHETSENGKVKLIILYQVIENIVQTTPIVQETKE
HHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCHHCCCC
>Mature Secondary Structure
MKNKWLSFFSGKIQLKITGKGIERLLNECTRRNIPMFNVKKKKDAVFLYIPLSDVHAFRK
CCCCCEEEECCEEEEEEECHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEHHHHHHHHH
VIRGFDCKCRFIKRKGFPFLVQKSKRNSGFTFGVAAFFIIMFLLSNMLWKIDITGANPET
HHCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCH
EHQIRQQLDQIGVKKGRFQFSMLTPEKIQQALTKRVENITWVGIELNGTALHMKVVEKNE
HHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCEEEEEEEECCCEEEEEEECCCC
PDKEKYIGPRHIVAKKGATISKMFVEKGEPLVTVNQHVEKGQMLVSGLIGSEEEKQKVGA
CCHHHCCCCHHEEECCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHCCC
KGKIYGETWYKSTVTVPLETSFDVFTGKVRTSHKLSLGSFSVPIWGFSFKKEDFSRPKTE
CCEEEECEEECEEEEEEECCCCCEEECCCCCCCEEECCCEECEEECCCCCHHHCCCCCCC
TEKHSLHFMNFKLPVAYEKEHMRESEQIKRVYSKKEAVLEGIEMGKRDIRKKIGRDGNII
CCCCCEEEEEEEECCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHH
SEKVLHETSENGKVKLIILYQVIENIVQTTPIVQETKE
HHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]