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The map label for this gene is yqfG [C]

Identifier: 52786458

GI number: 52786458

Start: 2619060

End: 2619536

Strand: Reverse

Name: yqfG [C]

Synonym: BLi02723

Alternate gene names: 52786458

Gene position: 2619536-2619060 (Counterclockwise)

Preceding gene: 52786459

Following gene: 52786457

Centisome position: 62.04

GC content: 47.8

Gene sequence:

>477_bases
ATGAGTTTAATTCTAGATATCACAGACGAGACCGGACGCGTCCCTGAAGACCGGCTTGCTGAAATTGAAAAGCTTCTTCA
ATTCGCAGCGGCGGAGGAAGGCGTCGCAGACGGCGCCGAAGTCTCGGTTACGATCGTCAACAATGAAGAGATACAAAAAA
TCAACAAAGAGTACAGAGGCAAAGATTACCCGACTGACGTCATTTCATTTGCCCTCGAAGAAGACGGCGAAGGAGAGGTT
GAAATTATCGGCGCTGATATGCCGCCCGTTCTCGGAGATATCATCATCAGCGTCGATAAAGCCCGGGAACAGGCCGAAGA
ATACGGACATTCACTGATGAGGGAGCTGGGTTTTCTGACGGTTCACGGCTTTTTGCACCTCCTCGGCTATGACCATATGA
CAGAGGAAGAAGAAAAAGAGATGTTCACTAAGCAAAAGGAAATTTTGAATCGATATGGGCTCTCAAGATCCTCATAA

Upstream 100 bases:

>100_bases
TCAATACTATCGCGAAGACGCTCTGCGAAACGCTGAAAGGCATTTTTCATTCCCGGATAGAATATCCGGAAGCTAATCCT
AAACAGAAGGTGAAACATAC

Downstream 100 bases:

>100_bases
ACAAAACGAATGGCGCCGTCTGAAAATGAGTTTTTCAAACGCCTTTACAGGAATTATCAAGACGTTCATATCAGAGCGCA
ATTTTAGAATTCACTGCGGA

Product: putative metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSLILDITDETGRVPEDRLAEIEKLLQFAAAEEGVADGAEVSVTIVNNEEIQKINKEYRGKDYPTDVISFALEEDGEGEV
EIIGADMPPVLGDIIISVDKAREQAEEYGHSLMRELGFLTVHGFLHLLGYDHMTEEEEKEMFTKQKEILNRYGLSRSS

Sequences:

>Translated_158_residues
MSLILDITDETGRVPEDRLAEIEKLLQFAAAEEGVADGAEVSVTIVNNEEIQKINKEYRGKDYPTDVISFALEEDGEGEV
EIIGADMPPVLGDIIISVDKAREQAEEYGHSLMRELGFLTVHGFLHLLGYDHMTEEEEKEMFTKQKEILNRYGLSRSS
>Mature_157_residues
SLILDITDETGRVPEDRLAEIEKLLQFAAAEEGVADGAEVSVTIVNNEEIQKINKEYRGKDYPTDVISFALEEDGEGEVE
IIGADMPPVLGDIIISVDKAREQAEEYGHSLMRELGFLTVHGFLHLLGYDHMTEEEEKEMFTKQKEILNRYGLSRSS

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family

Homologues:

Organism=Homo sapiens, GI54607072, Length=116, Percent_Identity=36.2068965517241, Blast_Score=70, Evalue=8e-13,
Organism=Escherichia coli, GI1786880, Length=120, Percent_Identity=35.8333333333333, Blast_Score=70, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RRMF_BACLD (Q65H70)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_079870.1
- RefSeq:   YP_092287.1
- ProteinModelPortal:   Q65H70
- SMR:   Q65H70
- STRING:   Q65H70
- EnsemblBacteria:   EBBACT00000058200
- EnsemblBacteria:   EBBACT00000061399
- GeneID:   3027882
- GeneID:   3097747
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi02723
- KEGG:   bli:BL03671
- NMPDR:   fig|279010.5.peg.566
- eggNOG:   COG0319
- GeneTree:   EBGT00050000002084
- HOGENOM:   HBG734136
- OMA:   LNGYDHM
- ProtClustDB:   PRK00016
- BioCyc:   BLIC279010-1:BLI02723-MONOMER
- BioCyc:   BLIC279010:BL03671-MONOMER
- HAMAP:   MF_00009
- InterPro:   IPR023091
- InterPro:   IPR020549
- InterPro:   IPR002036
- Gene3D:   G3DSA:3.40.390.30
- TIGRFAMs:   TIGR00043

Pfam domain/function: PF02130 UPF0054

EC number: NA

Molecular weight: Translated: 17761; Mature: 17630

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: PS01306 UPF0054

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLILDITDETGRVPEDRLAEIEKLLQFAAAEEGVADGAEVSVTIVNNEEIQKINKEYRG
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHCC
KDYPTDVISFALEEDGEGEVEIIGADMPPVLGDIIISVDKAREQAEEYGHSLMRELGFLT
CCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHGFLHLLGYDHMTEEEEKEMFTKQKEILNRYGLSRSS
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLILDITDETGRVPEDRLAEIEKLLQFAAAEEGVADGAEVSVTIVNNEEIQKINKEYRG
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHCC
KDYPTDVISFALEEDGEGEVEIIGADMPPVLGDIIISVDKAREQAEEYGHSLMRELGFLT
CCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHGFLHLLGYDHMTEEEEKEMFTKQKEILNRYGLSRSS
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA