Click here to switch to the map view.

The map label for this gene is yocK [H]

Identifier: 52785991

GI number: 52785991

Start: 2203302

End: 2203784

Strand: Reverse

Name: yocK [H]

Synonym: BLi02246

Alternate gene names: 52785991

Gene position: 2203784-2203302 (Counterclockwise)

Preceding gene: 52785992

Following gene: 52785990

Centisome position: 52.19

GC content: 45.34

Gene sequence:

>483_bases
ATGCCATTGACAGAGGAACAAAAACAGCACCTTTACGATAAATTAATCAGCTTAAAAAACGAAATCACAGGTACAAAGTC
TGAGGTGCAGCCGATGAATGAAGAAACAGGCGAATTGTCAAACGGTATTGACAATCATCTTGCCGACCATGCCGGCGTGT
ATACCGAACGAATGAGGGACCAGGCTTTCCGGCAATCGGACGATGCTTTGCTGAAAGAGATCGAAGACGCTTTAAATAGG
ATGAAAGACGGCACATACGGCACGTGTGAAACAACGGGAAAAGAAATCCCCTATGAACGCCTTGAAGCGATTCCATATGC
GCGAAGAACCGCCGAAGCTCAAGCGGAAGCAAGACAAGAAGACCGCACAGAGAATGATCGGCAATTTACACGGCAAATGA
AGGATTTGACGAATAAAGAAACGATGGACCAAAAACATTCATACGTCTATGAACGGCTTGACCAGGAACAGGACTCCAAA
TAA

Upstream 100 bases:

>100_bases
TTCAAACGCTCCTTTGCGAATGAACGGTCTTTTTTTGCGGAGAAATGCACGTTTTCCCTTTTGGCAATCGGGTAATGAAA
AAGAAAGGAGGATGATCAAC

Downstream 100 bases:

>100_bases
AGCGCCCAATGGGTGCTTTTTTTGGTTAGAAAAATAAATGAGTTGACTTTCTATTTAAATGAAAGTAACATACTATTTGT
AAGTAAATATTAAAACGTTA

Product: YocK

Products: NA

Alternate protein names: GSP16O [H]

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MPLTEEQKQHLYDKLISLKNEITGTKSEVQPMNEETGELSNGIDNHLADHAGVYTERMRDQAFRQSDDALLKEIEDALNR
MKDGTYGTCETTGKEIPYERLEAIPYARRTAEAQAEARQEDRTENDRQFTRQMKDLTNKETMDQKHSYVYERLDQEQDSK

Sequences:

>Translated_160_residues
MPLTEEQKQHLYDKLISLKNEITGTKSEVQPMNEETGELSNGIDNHLADHAGVYTERMRDQAFRQSDDALLKEIEDALNR
MKDGTYGTCETTGKEIPYERLEAIPYARRTAEAQAEARQEDRTENDRQFTRQMKDLTNKETMDQKHSYVYERLDQEQDSK
>Mature_159_residues
PLTEEQKQHLYDKLISLKNEITGTKSEVQPMNEETGELSNGIDNHLADHAGVYTERMRDQAFRQSDDALLKEIEDALNRM
KDGTYGTCETTGKEIPYERLEAIPYARRTAEAQAEARQEDRTENDRQFTRQMKDLTNKETMDQKHSYVYERLDQEQDSK

Specific function: Unknown

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 18679; Mature: 18548

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTEEQKQHLYDKLISLKNEITGTKSEVQPMNEETGELSNGIDNHLADHAGVYTERMRD
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QAFRQSDDALLKEIEDALNRMKDGTYGTCETTGKEIPYERLEAIPYARRTAEAQAEARQE
HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DRTENDRQFTRQMKDLTNKETMDQKHSYVYERLDQEQDSK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLTEEQKQHLYDKLISLKNEITGTKSEVQPMNEETGELSNGIDNHLADHAGVYTERMRD
CCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QAFRQSDDALLKEIEDALNRMKDGTYGTCETTGKEIPYERLEAIPYARRTAEAQAEARQE
HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DRTENDRQFTRQMKDLTNKETMDQKHSYVYERLDQEQDSK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]