Click here to switch to the map view.

The map label for this gene is cotD2 [H]

Identifier: 52785979

GI number: 52785979

Start: 2192525

End: 2192773

Strand: Reverse

Name: cotD2 [H]

Synonym: BLi02234

Alternate gene names: 52785979

Gene position: 2192773-2192525 (Counterclockwise)

Preceding gene: 52785980

Following gene: 52785978

Centisome position: 51.93

GC content: 36.14

Gene sequence:

>249_bases
ATGTATTGCAAACATCATGAGCCGCATGTTTACCCTACGAAATATTGTGAGGATCATCATTACTCAAAATCTGTCGTTCC
TCATATTCATCCACAGCATACAAAAAAAATAGACCACCACAAGTATGAACATGTTCATTACTATCCGCACACTTACTCAC
ATCATAAAGATGTTTCACATGAACACTATCATTGCGGAAAACCTTGCAAAAGCTATGAAAAAAAATCGGATTACGGCCAT
TGCTATTAA

Upstream 100 bases:

>100_bases
AAATTAGGGACAAAGCATAGGTGCTTATGCAGTCGGGCTTTAGCTTTTCAGCATAATGTACTAGTGAATCTATAAAACAA
AGGGAAAGGAGAATGTACGA

Downstream 100 bases:

>100_bases
TTAAGGCTTAATTGTACTTTCACAGACCATATAAATACCCGGCAGGGGTCTTTTATGGTCTGTTCCTATTTTATAAGGGA
GCTACCATGTATATCAACGT

Product: CotD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MYCKHHEPHVYPTKYCEDHHYSKSVVPHIHPQHTKKIDHHKYEHVHYYPHTYSHHKDVSHEHYHCGKPCKSYEKKSDYGH
CY

Sequences:

>Translated_82_residues
MYCKHHEPHVYPTKYCEDHHYSKSVVPHIHPQHTKKIDHHKYEHVHYYPHTYSHHKDVSHEHYHCGKPCKSYEKKSDYGH
CY
>Mature_82_residues
MYCKHHEPHVYPTKYCEDHHYSKSVVPHIHPQHTKKIDHHKYEHVHYYPHTYSHHKDVSHEHYHCGKPCKSYEKKSDYGH
CY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020108
- ProDom:   PD057197 [H]

Pfam domain/function: PF11122 Spore-coat_CotD [H]

EC number: NA

Molecular weight: Translated: 10117; Mature: 10117

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCKHHEPHVYPTKYCEDHHYSKSVVPHIHPQHTKKIDHHKYEHVHYYPHTYSHHKDVSH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
EHYHCGKPCKSYEKKSDYGHCY
CCCCCCCCCCHHCCCCCCCCCC
>Mature Secondary Structure
MYCKHHEPHVYPTKYCEDHHYSKSVVPHIHPQHTKKIDHHKYEHVHYYPHTYSHHKDVSH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
EHYHCGKPCKSYEKKSDYGHCY
CCCCCCCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2821284; 8760912; 9384377; 1691789 [H]