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The map label for this gene is ycfF [C]

Identifier: 52785754

GI number: 52785754

Start: 1953807

End: 1954235

Strand: Direct

Name: ycfF [C]

Synonym: BLi01998

Alternate gene names: 52785754

Gene position: 1953807-1954235 (Clockwise)

Preceding gene: 52785752

Following gene: 52785755

Centisome position: 46.27

GC content: 31.7

Gene sequence:

>429_bases
ATGAATAGTGAAATAGACAAATGTATATTTTGTGAAATAGTTAGTCGGAAAATTTCAAGTTTTGAGGTTTATAAAACTGA
CTATGTGACAGCATTTCTTGATATAAATCCTGTTACAAATGGCCATACATTAATCATACCAAATAAGCATATTGAAAGAC
TGGATCATATAAACGATCCCCATCTATCTAATGAAATAATGGATTCTTTAATTAAAGTTCCTCAATTATTAATTCAGTCA
GGTATTTGTGATGACTACACGATACTCTCAGACAACGGTCACTTTGCTCAGCAAGATATTAAACACCTGCATTTTCATGT
CATACCGAGACATATGAATGAAAAGTTTGAATTCAAATTAAACACCGACTTTACTGCAGCTAAGAAGAGTAACTTACTTT
CGATATGGAAAAAGATTGTAGGGAGATGA

Upstream 100 bases:

>100_bases
ATGAATACATCTACTACGATGGTCGTCCTGGTGAAATCAGGCTAGAGCCGTCCGGTGCATCCGAAAAAAACTCCGGAAAG
AGAGGGACACTTAACAAAGT

Downstream 100 bases:

>100_bases
TGAGAAAAGATCGTACCAGAACTTTAAAAGTGGAAAGATGAGTTGATCTTTTGTTTTAGTGCGGGTTTTGCTGAATTCAT
CATTTCGGCCTCAGAAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MNSEIDKCIFCEIVSRKISSFEVYKTDYVTAFLDINPVTNGHTLIIPNKHIERLDHINDPHLSNEIMDSLIKVPQLLIQS
GICDDYTILSDNGHFAQQDIKHLHFHVIPRHMNEKFEFKLNTDFTAAKKSNLLSIWKKIVGR

Sequences:

>Translated_142_residues
MNSEIDKCIFCEIVSRKISSFEVYKTDYVTAFLDINPVTNGHTLIIPNKHIERLDHINDPHLSNEIMDSLIKVPQLLIQS
GICDDYTILSDNGHFAQQDIKHLHFHVIPRHMNEKFEFKLNTDFTAAKKSNLLSIWKKIVGR
>Mature_142_residues
MNSEIDKCIFCEIVSRKISSFEVYKTDYVTAFLDINPVTNGHTLIIPNKHIERLDHINDPHLSNEIMDSLIKVPQLLIQS
GICDDYTILSDNGHFAQQDIKHLHFHVIPRHMNEKFEFKLNTDFTAAKKSNLLSIWKKIVGR

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320078, Length=103, Percent_Identity=39.8058252427184, Blast_Score=87, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 16460; Mature: 16460

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSEIDKCIFCEIVSRKISSFEVYKTDYVTAFLDINPVTNGHTLIIPNKHIERLDHINDP
CCCCHHHHHHHHHHHHHHHCEEEEECCEEEEEEECCCCCCCCEEEECCHHHHHHHCCCCC
HLSNEIMDSLIKVPQLLIQSGICDDYTILSDNGHFAQQDIKHLHFHVIPRHMNEKFEFKL
CCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHEEECCCCCCEEEEEE
NTDFTAAKKSNLLSIWKKIVGR
CCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSEIDKCIFCEIVSRKISSFEVYKTDYVTAFLDINPVTNGHTLIIPNKHIERLDHINDP
CCCCHHHHHHHHHHHHHHHCEEEEECCEEEEEEECCCCCCCCEEEECCHHHHHHHCCCCC
HLSNEIMDSLIKVPQLLIQSGICDDYTILSDNGHFAQQDIKHLHFHVIPRHMNEKFEFKL
CCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHEEECCCCCCEEEEEE
NTDFTAAKKSNLLSIWKKIVGR
CCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]