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The map label for this gene is ymaD [H]

Identifier: 52785715

GI number: 52785715

Start: 1916319

End: 1916774

Strand: Direct

Name: ymaD [H]

Synonym: BLi01957

Alternate gene names: 52785715

Gene position: 1916319-1916774 (Clockwise)

Preceding gene: 52785713

Following gene: 52785718

Centisome position: 45.38

GC content: 50.0

Gene sequence:

>456_bases
ATGGCTAAACATCATTTTTACCTTCAGGCAGACTGGCCTGGAAAACGAAACGACATCGGAAGGATTGAAAGCGGGAATTT
AAAAACCGAAATTTCGATACCAAAGGAAATGGACGGCCCGGGGGCGGGGACAAACCCTGACGAAATGCTGCTCGGTGCCG
CTGCGACTTGCTATATCATTACACTTGCAGCGATGATGGAAAGAAGCGGATTGGAAAAAGAGAGCCTGACGATGGAATCC
GAGGCCGTTGTCGATGTGACAGGCGGGGTGTTTACGTACGAAAAAATCATTCACAGACCTCTGATCCGCCTCCCGAAAGA
AGCGGCGCAAAAAGAGGCCGAACTTGCCGAAAGACTGGCTAAAAAAGCGGAGACATCATGCATGATATCAAGGGCGGTTC
AGGGCAACGTCGCCATTGAATTAGAGCCGAAGATTGTCGTCTCCAAAGCGGATTAG

Upstream 100 bases:

>100_bases
GTGTGTTAGACAGTTGTCACGGTTTGATAGGCAAATAATAAGACAGAAAGGTCAAATACCGGTAGACTTTTAAGCAGGAT
AAAAAAAGGAGGTATTTTTT

Downstream 100 bases:

>100_bases
ATTTCGATCGTGAGCTGAGCCTTTTGATCCGCTGCTTCGGTGCGCTTTGAATTGAGCAGAAAGACGCCGCCGATGATCAA
AGTAAGCCCAATAAGAGTTT

Product: YmaD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MAKHHFYLQADWPGKRNDIGRIESGNLKTEISIPKEMDGPGAGTNPDEMLLGAAATCYIITLAAMMERSGLEKESLTMES
EAVVDVTGGVFTYEKIIHRPLIRLPKEAAQKEAELAERLAKKAETSCMISRAVQGNVAIELEPKIVVSKAD

Sequences:

>Translated_151_residues
MAKHHFYLQADWPGKRNDIGRIESGNLKTEISIPKEMDGPGAGTNPDEMLLGAAATCYIITLAAMMERSGLEKESLTMES
EAVVDVTGGVFTYEKIIHRPLIRLPKEAAQKEAELAERLAKKAETSCMISRAVQGNVAIELEPKIVVSKAD
>Mature_150_residues
AKHHFYLQADWPGKRNDIGRIESGNLKTEISIPKEMDGPGAGTNPDEMLLGAAATCYIITLAAMMERSGLEKESLTMESE
AVVDVTGGVFTYEKIIHRPLIRLPKEAAQKEAELAERLAKKAETSCMISRAVQGNVAIELEPKIVVSKAD

Specific function: Unknown

COG id: COG1764

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the osmC/ohr family [H]

Homologues:

None

Paralogues:

None

Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR019905
- InterPro:   IPR003718 [H]

Pfam domain/function: PF02566 OsmC [H]

EC number: NA

Molecular weight: Translated: 16483; Mature: 16352

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKHHFYLQADWPGKRNDIGRIESGNLKTEISIPKEMDGPGAGTNPDEMLLGAAATCYII
CCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
TLAAMMERSGLEKESLTMESEAVVDVTGGVFTYEKIIHRPLIRLPKEAAQKEAELAERLA
HHHHHHHHCCCCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KKAETSCMISRAVQGNVAIELEPKIVVSKAD
HHHHHHHHHHHHCCCCEEEEECCEEEEEECC
>Mature Secondary Structure 
AKHHFYLQADWPGKRNDIGRIESGNLKTEISIPKEMDGPGAGTNPDEMLLGAAATCYII
CCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
TLAAMMERSGLEKESLTMESEAVVDVTGGVFTYEKIIHRPLIRLPKEAAQKEAELAERLA
HHHHHHHHCCCCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KKAETSCMISRAVQGNVAIELEPKIVVSKAD
HHHHHHHHHHHHCCCCEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]