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The map label for this gene is recA

Identifier: 52785676

GI number: 52785676

Start: 1877534

End: 1878580

Strand: Direct

Name: recA

Synonym: BLi01918

Alternate gene names: 52785676

Gene position: 1877534-1878580 (Clockwise)

Preceding gene: 52785675

Following gene: 52785677

Centisome position: 44.46

GC content: 51.48

Gene sequence:

>1047_bases
ATGAGTGATCGTCAGGCAGCCTTAGATATGGCGCTTAAACAAATAGAAAAGCAGTTTGGTAAAGGTTCGATTATGAAACT
CGGCGAACAAACTGAAACGAGAATTTCAACAGTTCCGAGCGGTTCTTTAGCGCTCGATGCGGCTCTTGGAGTGGGCGGAT
ACCCGCGCGGCCGGATTATTGAAGTATACGGGCCTGAAAGCTCCGGTAAAACGACGGTGGCGCTTCATGCGATTGCCGAA
GTTCAGCAGCAGGGCGGACAAGCGGCGTTCATCGACGCCGAACACGCGCTTGATCCCGTCTATGCACAAAAGCTGGGCGT
CAACATTGATGAGCTTTTGCTGTCACAGCCTGATACGGGCGAGCAGGCGCTCGAAATCGCTGAAGCCCTTGTCAGAAGCG
GAGCGGTGGATATCGTTGTCATCGACTCTGTAGCAGCGCTTGTGCCGAAAGCTGAAATCGAAGGAGATATGGGGGATTCC
CACGTCGGTTTGCAGGCCAGACTGATGTCTCAGGCGCTTCGCAAGCTTTCCGGAGCGATCAATAAATCGAAGACCATCGC
GATCTTTATCAACCAGATTCGTGAAAAAGTCGGTGTCATGTTTGGAAATCCTGAGACGACGCCAGGCGGAAGAGCGCTGA
AATTCTACTCTTCTGTCCGCCTTGAAGTGCGCCGCGCAGAGCAGCTGAAACAAGGCAACGACGTCATGGGGAACAAGACG
AAAATCAAAGTCGTGAAAAACAAAGTGGCACCTCCATTCCGGACAGCCGAAGTGGACATTATGTACGGGGAAGGAATTTC
AAAAGAAGGGGAAATCATCGACCTCGGAACAGAGCTTGACATCGTTCAAAAGAGCGGTGCATGGTACTCTTATCAGGAGG
AACGCCTTGGACAAGGCCGTGAAAACGCCAAACAGTTCCTGAAAGAAAACAAGGATATCCTTTTGATGATTCAAGAGCAG
ATCCGGGAGCACTACGGTTTGGATACTGGAGGCGCTGCTCCTGCACAGGAAGACGAGGCCCAAGCTCAGGAAGAACTCGA
GTTTTAA

Upstream 100 bases:

>100_bases
TCCTCTTAAAAAAATCGAATATGCGTTCGCTTTTTTCTTGGCAAATCCGCATAAACAAGGTATAGTAGATATAGCGGAAG
TGATAAAGGAGGAAAATAGA

Downstream 100 bases:

>100_bases
TCATGAAACGTGTGAAAGGCTGCCGGCCCGATCGGCAGCCTTTTACTTTATTCTTCGCTTTCAGGCGCTTCTCTTCCATC
CATCCTCTTCATGAGGGCAG

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MSDRQAALDMALKQIEKQFGKGSIMKLGEQTETRISTVPSGSLALDAALGVGGYPRGRIIEVYGPESSGKTTVALHAIAE
VQQQGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDIVVIDSVAALVPKAEIEGDMGDS
HVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKT
KIKVVKNKVAPPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGAWYSYQEERLGQGRENAKQFLKENKDILLMIQEQ
IREHYGLDTGGAAPAQEDEAQAQEELEF

Sequences:

>Translated_348_residues
MSDRQAALDMALKQIEKQFGKGSIMKLGEQTETRISTVPSGSLALDAALGVGGYPRGRIIEVYGPESSGKTTVALHAIAE
VQQQGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDIVVIDSVAALVPKAEIEGDMGDS
HVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKT
KIKVVKNKVAPPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGAWYSYQEERLGQGRENAKQFLKENKDILLMIQEQ
IREHYGLDTGGAAPAQEDEAQAQEELEF
>Mature_347_residues
SDRQAALDMALKQIEKQFGKGSIMKLGEQTETRISTVPSGSLALDAALGVGGYPRGRIIEVYGPESSGKTTVALHAIAEV
QQQGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDIVVIDSVAALVPKAEIEGDMGDSH
VGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKTK
IKVVKNKVAPPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGAWYSYQEERLGQGRENAKQFLKENKDILLMIQEQI
REHYGLDTGGAAPAQEDEAQAQEELEF

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=321, Percent_Identity=62.6168224299065, Blast_Score=432, Evalue=1e-122,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_BACLD (Q65JF2)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_079090.1
- RefSeq:   YP_091505.1
- ProteinModelPortal:   Q65JF2
- SMR:   Q65JF2
- STRING:   Q65JF2
- EnsemblBacteria:   EBBACT00000056298
- EnsemblBacteria:   EBBACT00000059004
- GeneID:   3031133
- GeneID:   3099159
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi01918
- KEGG:   bli:BL05164
- NMPDR:   fig|279010.5.peg.2621
- eggNOG:   COG0468
- GeneTree:   EBGT00050000002249
- HOGENOM:   HBG339889
- OMA:   MAQAPDR
- ProtClustDB:   PRK09354
- BioCyc:   BLIC279010-1:BLI01918-MONOMER
- BioCyc:   BLIC279010:BL05164-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 37735; Mature: 37604

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRQAALDMALKQIEKQFGKGSIMKLGEQTETRISTVPSGSLALDAALGVGGYPRGRII
CCCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHCCCCCCEEEEHHHCCCCCCCCCEE
EVYGPESSGKTTVALHAIAEVQQQGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDTG
EEECCCCCCCEEEHHHHHHHHHHCCCCEEEEEHHHHCCHHHHHHHCCCHHHHHHCCCCCH
EQALEIAEALVRSGAVDIVVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGAI
HHHHHHHHHHHHCCCEEEEEECHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHC
NKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKT
CCCCEEEHHHHHHHHHHCEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCE
KIKVVKNKVAPPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGAWYSYQEERLGQGR
EEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEECCCCCCCCHHHHHCCCH
ENAKQFLKENKDILLMIQEQIREHYGLDTGGAAPAQEDEAQAQEELEF
HHHHHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SDRQAALDMALKQIEKQFGKGSIMKLGEQTETRISTVPSGSLALDAALGVGGYPRGRII
CCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHCCCCCCEEEEHHHCCCCCCCCCEE
EVYGPESSGKTTVALHAIAEVQQQGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDTG
EEECCCCCCCEEEHHHHHHHHHHCCCCEEEEEHHHHCCHHHHHHHCCCHHHHHHCCCCCH
EQALEIAEALVRSGAVDIVVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGAI
HHHHHHHHHHHHCCCEEEEEECHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHC
NKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKT
CCCCEEEHHHHHHHHHHCEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCE
KIKVVKNKVAPPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGAWYSYQEERLGQGR
EEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEECCCCCCCCHHHHHCCCH
ENAKQFLKENKDILLMIQEQIREHYGLDTGGAAPAQEDEAQAQEELEF
HHHHHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA