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The map label for this gene is spoVFB [H]

Identifier: 52785658

GI number: 52785658

Start: 1858136

End: 1858726

Strand: Direct

Name: spoVFB [H]

Synonym: BLi01899

Alternate gene names: 52785658

Gene position: 1858136-1858726 (Clockwise)

Preceding gene: 52785657

Following gene: 52785659

Centisome position: 44.0

GC content: 50.25

Gene sequence:

>591_bases
ATGTCGATCAAAGGAAAAAGAATCGGATTTGGCCTAACGGGTTCACATTGTACGTATGATGCCGTTTTTCCGCAGATTGA
AGCGCTGATCAACAAAGGGGCTGAAGTCAGACCGGTCGTGACGCATACTGTCAAGTCGACGGATACACGCTTTGGAGAAG
GGGAAGAATGGGTCAGAAGAATAGAAGAGCTGACTGGATTTGAAGTCATTGATTCCATTCCGAAAGCTGAGCCTCTCGGG
CCGAAAACACCGCTGGACTGCATGGTTGTTGCGCCATTGACGGGAAATTCGATGAGCAAGCTTGCAAACGCCCAGACGGA
CAGTCCGGTTCTCATGGCGGCCAAAGCGACGATGAGAAACTCCCGTCCCGTCGTCCTCGGCATTTCAACGAATGACGCGC
TCGGCTTGAACGGCGTCAACTTGATGAGGCTGATGGCGGCAAAAAATGTTTACTTTATTCCGTTCGGCCAGGATGACCCT
TACAAAAAGCCGAATTCGCTCGTCGCCAAAATGGATCTTTTAGTGCCGGCGGTCGAAGAAGCGCTCTCCCATAAACAAAT
ACAGCCTATCCTGGTCCATAATGATCAATAA

Upstream 100 bases:

>100_bases
TTCCCGGGATCGTCGCGCCTAAAACGGCGGGACAGATCATTGCCAATGTTTTGTGCAACCTTTTGTCTGAATTAACAACT
GACCGAAAGGGGCTGTCATA

Downstream 100 bases:

>100_bases
ATCTTTTGAAAATAAAGATGTAACAAAAAATATCAATCACCACGGCACACATCTATGTTAAAATAAAATGTAAAATGCAT
AGTCAACCAATCGTTTACGA

Product: dipicolinate synthase subunit B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSIKGKRIGFGLTGSHCTYDAVFPQIEALINKGAEVRPVVTHTVKSTDTRFGEGEEWVRRIEELTGFEVIDSIPKAEPLG
PKTPLDCMVVAPLTGNSMSKLANAQTDSPVLMAAKATMRNSRPVVLGISTNDALGLNGVNLMRLMAAKNVYFIPFGQDDP
YKKPNSLVAKMDLLVPAVEEALSHKQIQPILVHNDQ

Sequences:

>Translated_196_residues
MSIKGKRIGFGLTGSHCTYDAVFPQIEALINKGAEVRPVVTHTVKSTDTRFGEGEEWVRRIEELTGFEVIDSIPKAEPLG
PKTPLDCMVVAPLTGNSMSKLANAQTDSPVLMAAKATMRNSRPVVLGISTNDALGLNGVNLMRLMAAKNVYFIPFGQDDP
YKKPNSLVAKMDLLVPAVEEALSHKQIQPILVHNDQ
>Mature_195_residues
SIKGKRIGFGLTGSHCTYDAVFPQIEALINKGAEVRPVVTHTVKSTDTRFGEGEEWVRRIEELTGFEVIDSIPKAEPLGP
KTPLDCMVVAPLTGNSMSKLANAQTDSPVLMAAKATMRNSRPVVLGISTNDALGLNGVNLMRLMAAKNVYFIPFGQDDPY
KKPNSLVAKMDLLVPAVEEALSHKQIQPILVHNDQ

Specific function: Unknown

COG id: COG0452

COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014214
- InterPro:   IPR003382 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: NA

Molecular weight: Translated: 21311; Mature: 21180

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKGKRIGFGLTGSHCTYDAVFPQIEALINKGAEVRPVVTHTVKSTDTRFGEGEEWVRR
CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHH
IEELTGFEVIDSIPKAEPLGPKTPLDCMVVAPLTGNSMSKLANAQTDSPVLMAAKATMRN
HHHHCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCEEEEEHHHHCC
SRPVVLGISTNDALGLNGVNLMRLMAAKNVYFIPFGQDDPYKKPNSLVAKMDLLVPAVEE
CCCEEEEECCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
ALSHKQIQPILVHNDQ
HHHHCCCCEEEEECCC
>Mature Secondary Structure 
SIKGKRIGFGLTGSHCTYDAVFPQIEALINKGAEVRPVVTHTVKSTDTRFGEGEEWVRR
CCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHH
IEELTGFEVIDSIPKAEPLGPKTPLDCMVVAPLTGNSMSKLANAQTDSPVLMAAKATMRN
HHHHCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCEEEEEHHHHCC
SRPVVLGISTNDALGLNGVNLMRLMAAKNVYFIPFGQDDPYKKPNSLVAKMDLLVPAVEE
CCCEEEEECCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
ALSHKQIQPILVHNDQ
HHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8098035; 8345520; 9384377 [H]