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The map label for this gene is ylxS [H]

Identifier: 52785643

GI number: 52785643

Start: 1844563

End: 1845063

Strand: Direct

Name: ylxS [H]

Synonym: BLi01884

Alternate gene names: 52785643

Gene position: 1844563-1845063 (Clockwise)

Preceding gene: 52785642

Following gene: 52785644

Centisome position: 43.68

GC content: 45.11

Gene sequence:

>501_bases
ATGGGAGCCTGCACAAGGAGGAAAAGTATGAGTAACAAAGTGATCGATACCGTCAGCGAAATGGTCCAGCCTATACTAGA
CAATCTTCAGCTTGAGCTCGTTGACATCGAATTTGTCAAGGAAGGCCAGAGCTGGTTTCTTCGCGTGTTTATTGATTCAG
ATGACGGCGTAGACATCGAGGAATGTGCCAAGGTTAGCGAAGCTCTTAGTGAAAAGCTCGATGAGGCTGATCCGATCAAG
CAAAACTATTTTCTTGAAGTATCGTCCCCGGGAGCTGAGAGGCCTTTAAAGAAAGAAGCCGATTTCATGAAGGCGCTCGG
AAAAAACGTATATATTAAAACGTACGAACCTATTGAAGGCAATAAAGAGTTTGAAGGCGAGCTTTCCGCATTTGACGGTG
AAAACGTGGAGGTCACGGTGATGATCAAAACGCGCCGGAAAACGATCAATATTCCATATGACAAAGTAGCCAAAGCGAGG
CTGGCTGTTTCGTTCAATTAA

Upstream 100 bases:

>100_bases
CGCTCTTTTGTATTGAACAGGCAATTTTGTCTCGACATGTTCATCGTTTTTTCTAAAATCCCCTGCTTTTGAAGCAGGGT
TTTTACGAGGGAGCTGATGA

Downstream 100 bases:

>100_bases
TTTTTGACTGTTTAAGGGGGAAACCATAAACATGAGTAGTGAGTTGTTAGATGCCCTGACTGTTCTTGAAAAAGAAAAGG
GAATCAGTAAGGACATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MGACTRRKSMSNKVIDTVSEMVQPILDNLQLELVDIEFVKEGQSWFLRVFIDSDDGVDIEECAKVSEALSEKLDEADPIK
QNYFLEVSSPGAERPLKKEADFMKALGKNVYIKTYEPIEGNKEFEGELSAFDGENVEVTVMIKTRRKTINIPYDKVAKAR
LAVSFN

Sequences:

>Translated_166_residues
MGACTRRKSMSNKVIDTVSEMVQPILDNLQLELVDIEFVKEGQSWFLRVFIDSDDGVDIEECAKVSEALSEKLDEADPIK
QNYFLEVSSPGAERPLKKEADFMKALGKNVYIKTYEPIEGNKEFEGELSAFDGENVEVTVMIKTRRKTINIPYDKVAKAR
LAVSFN
>Mature_165_residues
GACTRRKSMSNKVIDTVSEMVQPILDNLQLELVDIEFVKEGQSWFLRVFIDSDDGVDIEECAKVSEALSEKLDEADPIKQ
NYFLEVSSPGAERPLKKEADFMKALGKNVYIKTYEPIEGNKEFEGELSAFDGENVEVTVMIKTRRKTINIPYDKVAKARL
AVSFN

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=123, Percent_Identity=39.0243902439024, Blast_Score=97, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 18776; Mature: 18644

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGACTRRKSMSNKVIDTVSEMVQPILDNLQLELVDIEFVKEGQSWFLRVFIDSDDGVDIE
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHEEECCCCEEEEEEEEECCCCCCHH
ECAKVSEALSEKLDEADPIKQNYFLEVSSPGAERPLKKEADFMKALGKNVYIKTYEPIEG
HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCC
NKEFEGELSAFDGENVEVTVMIKTRRKTINIPYDKVAKARLAVSFN
CCCCCCCEEECCCCCEEEEEEEEECCEEEECCHHHHHHEEEEEECC
>Mature Secondary Structure 
GACTRRKSMSNKVIDTVSEMVQPILDNLQLELVDIEFVKEGQSWFLRVFIDSDDGVDIE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHEEECCCCEEEEEEEEECCCCCCHH
ECAKVSEALSEKLDEADPIKQNYFLEVSSPGAERPLKKEADFMKALGKNVYIKTYEPIEG
HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCC
NKEFEGELSAFDGENVEVTVMIKTRRKTINIPYDKVAKARLAVSFN
CCCCCCCEEECCCCCEEEEEEEEECCEEEECCHHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA