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The map label for this gene is tsf

Identifier: 52785630

GI number: 52785630

Start: 1824065

End: 1824946

Strand: Direct

Name: tsf

Synonym: BLi01871

Alternate gene names: 52785630

Gene position: 1824065-1824946 (Clockwise)

Preceding gene: 52785629

Following gene: 52785631

Centisome position: 43.2

GC content: 47.05

Gene sequence:

>882_bases
ATGGCAATTACTGCACAAATGGTAAAAGAGCTTCGCGAAAAAACTGGCGCAGGCATGATGGACTGCAAGAAAGCGTTAAC
TGAAACTGACGGCAACATGGATAAAGCGATCGATCTTCTAAGAGAAAAAGGAATCGCAAAGGCTGCCAAAAAAGCTGACC
GCATCGCGGCTGAAGGCTTGACTTTGATCAAAACCGACGGCAACACAGGCGTTATTCTTGAAGTGAACTCTGAAACGGAC
TTCGTTGCGAAAAACGAAGGCTTCAAGGAGCTTTTGAACGACCTGGCTGACCACATTCTGGCTGAAAAGCCTGAAAGCGT
TGAAGCTGCTATGGGTCAAAAAATGGCTAACGGTTCAACTGTAGAAGAATACATCACAAGCGCGGTTGCTAAAATCGGAG
AAAAAATCACGCTTCGCCGCTTCGCTGTCCTGACAAAAGGCGATGACGCTGCATTCGGCGCATACCTGCACATGGGCGGA
AAAATCGGCGTATTGACTGTCCTTAACGGCACAACTGACGAAGAAACAGCAAGAGACATCGCAATGCACGTTGCAGCTGT
AAACCCTCGCTTCATTTCCCGCGACCAAGTGTCAGAAGAAGAAGCGAACCGCGAGCGCGAAATCTTGACTCAGCAGGCGC
TTCAAGAAGGCAAGCCTGAAAACATCGTCGCAAAAATGGTTGAAGGCCGCCTGAACAAATATTTCGAAGAAATCTGCCTG
CTTGATCAAGCGTTCGTTAAAAACCCGGATGAAAAAGTGAAACAGGTCGTTGCTGCGAAAAACGCAACGGTTGAAACGTT
CGTCCGCTACGAAGTTGGAGAAGGTATCGAAAAACGCCAAGAAAACTTTGCTGAAGAAGTTATGAACCAAGTGAAAAAAT
AA

Upstream 100 bases:

>100_bases
CCTGGTCAAAAGGTGATAAGGGGGTCTGCCTTTTATCACCTTTTTTTTCACCAGATCAACATTTACATATTTTGTTTGAT
ATATAAGGAGGAAATCAAAA

Downstream 100 bases:

>100_bases
GATTGAAAAGCCGCTTGCCATAAAACACACGGCAGGATCTTTTCAAGGAAAATAGGGGACACAATTTGTGTCCCTATTTT
TAAAACAGTTTACAAACCTT

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAITAQMVKELREKTGAGMMDCKKALTETDGNMDKAIDLLREKGIAKAAKKADRIAAEGLTLIKTDGNTGVILEVNSETD
FVAKNEGFKELLNDLADHILAEKPESVEAAMGQKMANGSTVEEYITSAVAKIGEKITLRRFAVLTKGDDAAFGAYLHMGG
KIGVLTVLNGTTDEETARDIAMHVAAVNPRFISRDQVSEEEANREREILTQQALQEGKPENIVAKMVEGRLNKYFEEICL
LDQAFVKNPDEKVKQVVAAKNATVETFVRYEVGEGIEKRQENFAEEVMNQVKK

Sequences:

>Translated_293_residues
MAITAQMVKELREKTGAGMMDCKKALTETDGNMDKAIDLLREKGIAKAAKKADRIAAEGLTLIKTDGNTGVILEVNSETD
FVAKNEGFKELLNDLADHILAEKPESVEAAMGQKMANGSTVEEYITSAVAKIGEKITLRRFAVLTKGDDAAFGAYLHMGG
KIGVLTVLNGTTDEETARDIAMHVAAVNPRFISRDQVSEEEANREREILTQQALQEGKPENIVAKMVEGRLNKYFEEICL
LDQAFVKNPDEKVKQVVAAKNATVETFVRYEVGEGIEKRQENFAEEVMNQVKK
>Mature_292_residues
AITAQMVKELREKTGAGMMDCKKALTETDGNMDKAIDLLREKGIAKAAKKADRIAAEGLTLIKTDGNTGVILEVNSETDF
VAKNEGFKELLNDLADHILAEKPESVEAAMGQKMANGSTVEEYITSAVAKIGEKITLRRFAVLTKGDDAAFGAYLHMGGK
IGVLTVLNGTTDEETARDIAMHVAAVNPRFISRDQVSEEEANREREILTQQALQEGKPENIVAKMVEGRLNKYFEEICLL
DQAFVKNPDEKVKQVVAAKNATVETFVRYEVGEGIEKRQENFAEEVMNQVKK

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI171846268, Length=307, Percent_Identity=25.4071661237785, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI291084500, Length=324, Percent_Identity=24.6913580246914, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI291084498, Length=99, Percent_Identity=41.4141414141414, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI291084502, Length=99, Percent_Identity=41.4141414141414, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1786366, Length=285, Percent_Identity=49.1228070175439, Blast_Score=242, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI17561440, Length=304, Percent_Identity=29.2763157894737, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI19921466, Length=303, Percent_Identity=24.7524752475248, Blast_Score=89, Evalue=4e-18,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_BACLD (Q65JJ8)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_079044.2
- RefSeq:   YP_091459.1
- ProteinModelPortal:   Q65JJ8
- SMR:   Q65JJ8
- STRING:   Q65JJ8
- EnsemblBacteria:   EBBACT00000058026
- EnsemblBacteria:   EBBACT00000061091
- GeneID:   3031063
- GeneID:   3101366
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi01871
- KEGG:   bli:BL01243
- NMPDR:   fig|279010.5.peg.2575
- eggNOG:   COG0264
- GeneTree:   EBGT00050000002313
- HOGENOM:   HBG713289
- ProtClustDB:   PRK09377
- BioCyc:   BLIC279010-1:BLI01871-MONOMER
- BioCyc:   BLIC279010:BL01243-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 32226; Mature: 32095

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITAQMVKELREKTGAGMMDCKKALTETDGNMDKAIDLLREKGIAKAAKKADRIAAEGL
CCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCE
TLIKTDGNTGVILEVNSETDFVAKNEGFKELLNDLADHILAEKPESVEAAMGQKMANGST
EEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH
VEEYITSAVAKIGEKITLRRFAVLTKGDDAAFGAYLHMGGKIGVLTVLNGTTDEETARDI
HHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH
AMHVAAVNPRFISRDQVSEEEANREREILTQQALQEGKPENIVAKMVEGRLNKYFEEICL
HHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LDQAFVKNPDEKVKQVVAAKNATVETFVRYEVGEGIEKRQENFAEEVMNQVKK
HHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AITAQMVKELREKTGAGMMDCKKALTETDGNMDKAIDLLREKGIAKAAKKADRIAAEGL
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCE
TLIKTDGNTGVILEVNSETDFVAKNEGFKELLNDLADHILAEKPESVEAAMGQKMANGST
EEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH
VEEYITSAVAKIGEKITLRRFAVLTKGDDAAFGAYLHMGGKIGVLTVLNGTTDEETARDI
HHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH
AMHVAAVNPRFISRDQVSEEEANREREILTQQALQEGKPENIVAKMVEGRLNKYFEEICL
HHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LDQAFVKNPDEKVKQVVAAKNATVETFVRYEVGEGIEKRQENFAEEVMNQVKK
HHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA