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The map label for this gene is fliF [H]

Identifier: 52785600

GI number: 52785600

Start: 1797709

End: 1799310

Strand: Direct

Name: fliF [H]

Synonym: BLi01841

Alternate gene names: 52785600

Gene position: 1797709-1799310 (Clockwise)

Preceding gene: 52785599

Following gene: 52785601

Centisome position: 42.57

GC content: 45.69

Gene sequence:

>1602_bases
ATGAATCGTAATTTATTGCAAATTAAAACGAAAATAACTGATTTTTGGAAAAACAGATCAAAGCTGCAGAAGATTCTGCT
GATCGGCATTGTCGCTCTGGCAGTCATCCTGTCAATCATCATTGGAATTGTTGCTTCGTCAAATAAAATGGTGCCGCTCT
ATAAAGATTTGTCAGCTGAAGAAACCGGCCAAATCAAACAGGTGCTCGATGAAAAAGGTATTCCATCTGAAGTTGCGACT
GACGGTTCAGTCATCAAAGTTCCGGAAGAAAAAGTCGATGAACTGAAAGTCGATCTTGCCGCAGAGGGCCTTCCGAAAAG
CGGGAGCATCGATTATTCATTCTTTGGCGAAAATGCCGGTTTTGGCATGACGGACAACGAATTTGACGTTTTGAAAGTGA
AAGCCACGCAAACCGAGCTATCCAACCTCATCAAAGGAATAGACGGGATTAAAGATTCGAAGGTTATGATTAACCTGCCG
AAGGAATCCGTCTTTGTCGGAGAGGAAAAGCCGGAAGCATCCGCTTCGATTGTTCTTCAGGTGAAGCCCGGCCACACGCT
TGATCAAAATGAAATCAACGGCCTTTATCATCTCGTATCGAAAAGCGTGCCGAACCTTGACCCGAAAAACATCGTGATCA
TGGATCAAAACTCCACATATTACGATCAAACAGGCAAAGAGTCCGGTTCTTACGCCGACAGCTATTCTTCCCAAAGGGAA
GTCAAGGCCCAGATCGAAAAGGACCTGCAAAGACAAATCCAAACCATGCTCGGCACGATGATGGGACAGGATAAAGTGGT
TGTATCCGTCACATCTGACATCGATTTCACAAAAGAAAACAGGACGGAAGACCTGGTTGAACCTGTCGACAAAGAAAATA
TGGAAGGAATCACGGTCAGCGCAGAGCGCGTCAGTGAAACATATTCCGGACAGGGAGCACAAGCGGGAGGCGTCAACGGA
ACAGGTGAAAACGATGTAACGAACTATGCTGAAACAGAAGGCGGAACAGGCAACGGAGACTATGAGAAAAGCGAAGAACG
AATCAACAATGAAGTCAACAGAATCCATAAAGAAATCGCTGAGAGCCCGTACAAAATCAGAGATCTGGGCGTCCAGGTCA
TGGTTGAACCGCCTGATGCAAACAACCCGCAGTCACTGCCTGCTGAAAGGGAGGACGATATTAAAAAAATCCTCTCAACC
ATTGTGAAAACATCGATTGACAAGAACTATGAAGAAGAGCCTCTGACAGATGAGGATGTTGAAAATAAAATCGTTGTTTC
TGTCCAATCGTTCGACGGCAAGCAGACAATCGATGAAGGAACGGAAACAGGCGGCATACCGATGTGGGCTTACATCGCAG
GCGGAGCAGCGCTTGTTGCTGTAATCGGCCTCATCATCTGGCTTGTCAGAAGACGTAAAAATAGAGATGACGAATACGAG
GAAGAATGGTATGAAACGCCTCAGGAGCCGATTCGGGTTGCTGATGTGAACAATGAAAAAGAGACAGAAGAAACTGTCAG
ACGAAAACAGCTTGAAAAAATGGCGAAAGACAAGCCTGAAGAATTCGCCAAATTACTGCGCAGCTGGCTGACCGAGGATT
AG

Upstream 100 bases:

>100_bases
GCAACAAAGCGGTTGAAGCTTATCAGGAAATCATGAGAATGCAAATGTAAGAAAGGAGTCTGAAAGCGAAGAGAATTAGT
GTAACTACCGGGGGAGTAAG

Downstream 100 bases:

>100_bases
GAGGAGTATTGAAATGGCAAAAATGAAACAAGACAGGCTTACAGGCAAACAAAAAGCGGCCATTCTCATGATATCCTTAG
GGCTTGATGTGTCAGCTTCC

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MNRNLLQIKTKITDFWKNRSKLQKILLIGIVALAVILSIIIGIVASSNKMVPLYKDLSAEETGQIKQVLDEKGIPSEVAT
DGSVIKVPEEKVDELKVDLAAEGLPKSGSIDYSFFGENAGFGMTDNEFDVLKVKATQTELSNLIKGIDGIKDSKVMINLP
KESVFVGEEKPEASASIVLQVKPGHTLDQNEINGLYHLVSKSVPNLDPKNIVIMDQNSTYYDQTGKESGSYADSYSSQRE
VKAQIEKDLQRQIQTMLGTMMGQDKVVVSVTSDIDFTKENRTEDLVEPVDKENMEGITVSAERVSETYSGQGAQAGGVNG
TGENDVTNYAETEGGTGNGDYEKSEERINNEVNRIHKEIAESPYKIRDLGVQVMVEPPDANNPQSLPAEREDDIKKILST
IVKTSIDKNYEEEPLTDEDVENKIVVSVQSFDGKQTIDEGTETGGIPMWAYIAGGAALVAVIGLIIWLVRRRKNRDDEYE
EEWYETPQEPIRVADVNNEKETEETVRRKQLEKMAKDKPEEFAKLLRSWLTED

Sequences:

>Translated_533_residues
MNRNLLQIKTKITDFWKNRSKLQKILLIGIVALAVILSIIIGIVASSNKMVPLYKDLSAEETGQIKQVLDEKGIPSEVAT
DGSVIKVPEEKVDELKVDLAAEGLPKSGSIDYSFFGENAGFGMTDNEFDVLKVKATQTELSNLIKGIDGIKDSKVMINLP
KESVFVGEEKPEASASIVLQVKPGHTLDQNEINGLYHLVSKSVPNLDPKNIVIMDQNSTYYDQTGKESGSYADSYSSQRE
VKAQIEKDLQRQIQTMLGTMMGQDKVVVSVTSDIDFTKENRTEDLVEPVDKENMEGITVSAERVSETYSGQGAQAGGVNG
TGENDVTNYAETEGGTGNGDYEKSEERINNEVNRIHKEIAESPYKIRDLGVQVMVEPPDANNPQSLPAEREDDIKKILST
IVKTSIDKNYEEEPLTDEDVENKIVVSVQSFDGKQTIDEGTETGGIPMWAYIAGGAALVAVIGLIIWLVRRRKNRDDEYE
EEWYETPQEPIRVADVNNEKETEETVRRKQLEKMAKDKPEEFAKLLRSWLTED
>Mature_533_residues
MNRNLLQIKTKITDFWKNRSKLQKILLIGIVALAVILSIIIGIVASSNKMVPLYKDLSAEETGQIKQVLDEKGIPSEVAT
DGSVIKVPEEKVDELKVDLAAEGLPKSGSIDYSFFGENAGFGMTDNEFDVLKVKATQTELSNLIKGIDGIKDSKVMINLP
KESVFVGEEKPEASASIVLQVKPGHTLDQNEINGLYHLVSKSVPNLDPKNIVIMDQNSTYYDQTGKESGSYADSYSSQRE
VKAQIEKDLQRQIQTMLGTMMGQDKVVVSVTSDIDFTKENRTEDLVEPVDKENMEGITVSAERVSETYSGQGAQAGGVNG
TGENDVTNYAETEGGTGNGDYEKSEERINNEVNRIHKEIAESPYKIRDLGVQVMVEPPDANNPQSLPAEREDDIKKILST
IVKTSIDKNYEEEPLTDEDVENKIVVSVQSFDGKQTIDEGTETGGIPMWAYIAGGAALVAVIGLIIWLVRRRKNRDDEYE
EEWYETPQEPIRVADVNNEKETEETVRRKQLEKMAKDKPEEFAKLLRSWLTED

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=312, Percent_Identity=30.4487179487179, Blast_Score=143, Evalue=3e-35,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 59290; Mature: 59290

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRNLLQIKTKITDFWKNRSKLQKILLIGIVALAVILSIIIGIVASSNKMVPLYKDLSAE
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCC
ETGQIKQVLDEKGIPSEVATDGSVIKVPEEKVDELKVDLAAEGLPKSGSIDYSFFGENAG
HHHHHHHHHHHCCCCHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC
FGMTDNEFDVLKVKATQTELSNLIKGIDGIKDSKVMINLPKESVFVGEEKPEASASIVLQ
CCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCCCEEEEEE
VKPGHTLDQNEINGLYHLVSKSVPNLDPKNIVIMDQNSTYYDQTGKESGSYADSYSSQRE
ECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
VKAQIEKDLQRQIQTMLGTMMGQDKVVVSVTSDIDFTKENRTEDLVEPVDKENMEGITVS
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCEEEE
AERVSETYSGQGAQAGGVNGTGENDVTNYAETEGGTGNGDYEKSEERINNEVNRIHKEIA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ESPYKIRDLGVQVMVEPPDANNPQSLPAEREDDIKKILSTIVKTSIDKNYEEEPLTDEDV
CCCCEEEECCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ENKIVVSVQSFDGKQTIDEGTETGGIPMWAYIAGGAALVAVIGLIIWLVRRRKNRDDEYE
CCEEEEEEECCCCCHHHHCCCCCCCCCEEHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHH
EEWYETPQEPIRVADVNNEKETEETVRRKQLEKMAKDKPEEFAKLLRSWLTED
HHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRNLLQIKTKITDFWKNRSKLQKILLIGIVALAVILSIIIGIVASSNKMVPLYKDLSAE
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCC
ETGQIKQVLDEKGIPSEVATDGSVIKVPEEKVDELKVDLAAEGLPKSGSIDYSFFGENAG
HHHHHHHHHHHCCCCHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC
FGMTDNEFDVLKVKATQTELSNLIKGIDGIKDSKVMINLPKESVFVGEEKPEASASIVLQ
CCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCCCEEEEEE
VKPGHTLDQNEINGLYHLVSKSVPNLDPKNIVIMDQNSTYYDQTGKESGSYADSYSSQRE
ECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
VKAQIEKDLQRQIQTMLGTMMGQDKVVVSVTSDIDFTKENRTEDLVEPVDKENMEGITVS
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCEEEE
AERVSETYSGQGAQAGGVNGTGENDVTNYAETEGGTGNGDYEKSEERINNEVNRIHKEIA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ESPYKIRDLGVQVMVEPPDANNPQSLPAEREDDIKKILSTIVKTSIDKNYEEEPLTDEDV
CCCCEEEECCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ENKIVVSVQSFDGKQTIDEGTETGGIPMWAYIAGGAALVAVIGLIIWLVRRRKNRDDEYE
CCEEEEEEECCCCCHHHHCCCCCCCCCEEHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHH
EEWYETPQEPIRVADVNNEKETEETVRRKQLEKMAKDKPEEFAKLLRSWLTED
HHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377; 1828465 [H]