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The map label for this gene is yloC [H]

Identifier: 52785546

GI number: 52785546

Start: 1746384

End: 1747259

Strand: Direct

Name: yloC [H]

Synonym: BLi01787

Alternate gene names: 52785546

Gene position: 1746384-1747259 (Clockwise)

Preceding gene: 52785545

Following gene: 52785547

Centisome position: 41.36

GC content: 50.11

Gene sequence:

>876_bases
ATGATACGGAGTATGACCGGTTTCGGCAGCGCGAGCAAAACGAAGGATGGGCTGACAGCAGCTGTTGAGCTGAAATCTGT
CAACTATCGGTTTAAAGAAGTAAACGCCCGCATGCCAAGACCTTTGCTCTATTTAGAAGACAAAATAAAGCAAACGATTT
TTAAACATATACAAAGGGGGCGGCTGGAGCTGTTTGTTTCCGTTGACGACGAGGCTCTGGTCACCCGGAAAATCCAGGTT
GACTGGCCGCTGCTTGAAGAGTACCAGAAAGCCGCGCGCGAAATGAAAGACCGCTGCGGGCTTTCTGGAGACATCACGCT
TCAAGACGCCTTTCAGTTTGAGCATGTCATCCAAGTTGAAGAAGAGCCAATCCAAAATGACAAGCTTGAAGAGGTTCTTC
TGGAAGCGGTCGAGGCTGCCGTTCTAGAATTGTGCAGCATGCGCGAAGCGGAAGGGCTGAGGCTGAAGGACGACTGCCTT
CAGCATATTGAAAGGCTTGAAAAGCTGACAGACGACATCGCAGAGCTTGCTCCCAAGGTCGTCGACCACTATCGGGAACG
CCTTGAGGCGCGGCTTGAAGAATGGTCAACAGACGGTCTCGATGAAAGCCGCCTGCTGACGGAAGTCGCACTGTTTGCAG
ACCGTTCGGATATCACGGAAGAAGTGACGAGGCTGAAAAGCCATTTCCGCCAGTTCCGCGATATTTGCAAAGCGGGAGGA
GCCGCGGGGAGAAAGCTCGATTTCCTCGTCCAGGAGCTCAACCGTGAAGCGAACACGATCGGTTCAAAAGCGAATGATCA
CCAGATCACAAAACATGTGGTCGAAATGAAAAGCTCTATTGAAAAAATAAAAGAACAAGTGCAAAATATAGAATAG

Upstream 100 bases:

>100_bases
TATAATCTTAAAGGTAATAGAGGTTTCTATTGCCTTTTCATCTTGCGTAAATTTAAATCAAAGAAAGTCTTTTTCACTTA
TACGGAATTGGGTGTGTTTT

Downstream 100 bases:

>100_bases
CGATTGTGCGTATTGTTTACGGATGTTCTCTGCAGGTTAAACTAGAGACGTCCAAGTACAGGGGGAACGTATAGGATGAC
GATTAAACTGATCAATATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MIRSMTGFGSASKTKDGLTAAVELKSVNYRFKEVNARMPRPLLYLEDKIKQTIFKHIQRGRLELFVSVDDEALVTRKIQV
DWPLLEEYQKAAREMKDRCGLSGDITLQDAFQFEHVIQVEEEPIQNDKLEEVLLEAVEAAVLELCSMREAEGLRLKDDCL
QHIERLEKLTDDIAELAPKVVDHYRERLEARLEEWSTDGLDESRLLTEVALFADRSDITEEVTRLKSHFRQFRDICKAGG
AAGRKLDFLVQELNREANTIGSKANDHQITKHVVEMKSSIEKIKEQVQNIE

Sequences:

>Translated_291_residues
MIRSMTGFGSASKTKDGLTAAVELKSVNYRFKEVNARMPRPLLYLEDKIKQTIFKHIQRGRLELFVSVDDEALVTRKIQV
DWPLLEEYQKAAREMKDRCGLSGDITLQDAFQFEHVIQVEEEPIQNDKLEEVLLEAVEAAVLELCSMREAEGLRLKDDCL
QHIERLEKLTDDIAELAPKVVDHYRERLEARLEEWSTDGLDESRLLTEVALFADRSDITEEVTRLKSHFRQFRDICKAGG
AAGRKLDFLVQELNREANTIGSKANDHQITKHVVEMKSSIEKIKEQVQNIE
>Mature_291_residues
MIRSMTGFGSASKTKDGLTAAVELKSVNYRFKEVNARMPRPLLYLEDKIKQTIFKHIQRGRLELFVSVDDEALVTRKIQV
DWPLLEEYQKAAREMKDRCGLSGDITLQDAFQFEHVIQVEEEPIQNDKLEEVLLEAVEAAVLELCSMREAEGLRLKDDCL
QHIERLEKLTDDIAELAPKVVDHYRERLEARLEEWSTDGLDESRLLTEVALFADRSDITEEVTRLKSHFRQFRDICKAGG
AAGRKLDFLVQELNREANTIGSKANDHQITKHVVEMKSSIEKIKEQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=294, Percent_Identity=31.6326530612245, Blast_Score=132, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33497; Mature: 33497

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSMTGFGSASKTKDGLTAAVELKSVNYRFKEVNARMPRPLLYLEDKIKQTIFKHIQRG
CCCCCCCCCCCCCCCCCCHHHEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
RLELFVSVDDEALVTRKIQVDWPLLEEYQKAAREMKDRCGLSGDITLQDAFQFEHVIQVE
CEEEEEEECCHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
EEPIQNDKLEEVLLEAVEAAVLELCSMREAEGLRLKDDCLQHIERLEKLTDDIAELAPKV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VDHYRERLEARLEEWSTDGLDESRLLTEVALFADRSDITEEVTRLKSHFRQFRDICKAGG
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC
AAGRKLDFLVQELNREANTIGSKANDHQITKHVVEMKSSIEKIKEQVQNIE
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRSMTGFGSASKTKDGLTAAVELKSVNYRFKEVNARMPRPLLYLEDKIKQTIFKHIQRG
CCCCCCCCCCCCCCCCCCHHHEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
RLELFVSVDDEALVTRKIQVDWPLLEEYQKAAREMKDRCGLSGDITLQDAFQFEHVIQVE
CEEEEEEECCHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
EEPIQNDKLEEVLLEAVEAAVLELCSMREAEGLRLKDDCLQHIERLEKLTDDIAELAPKV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VDHYRERLEARLEEWSTDGLDESRLLTEVALFADRSDITEEVTRLKSHFRQFRDICKAGG
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC
AAGRKLDFLVQELNREANTIGSKANDHQITKHVVEMKSSIEKIKEQVQNIE
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]