| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is ylmA [H]
Identifier: 52785511
GI number: 52785511
Start: 1712048
End: 1712845
Strand: Direct
Name: ylmA [H]
Synonym: BLi01752
Alternate gene names: 52785511
Gene position: 1712048-1712845 (Clockwise)
Preceding gene: 52785510
Following gene: 52785512
Centisome position: 40.54
GC content: 50.0
Gene sequence:
>798_bases GTGGTTCTGCAGCTTGAGCATGCTTCACTAAAACGAAACGGAGAGTGGATATTAAAGGATATTGATTGGACGGTGGAAAA GGGGGAGCACTGGGCGTTATACGGATTGAACGGAGCCGGCAAAACCGCACTGCTCAATATGCTGTGCGCTTATTATTTTC CGACAATAGGAAAAGTCACCGTGTTAGGGCGCGAATTCGGAAAAACGGAGCTTGGCGAGAAGCTTCGGCGAAAAATCGGC CTTGTTTCAGCCGCCCTGCAGCAGAAGCTTTATCCTGAAGACAGTGCATTTGAAATTGTTTTAAGCGGCGCCTTCGCTTC GATCGGCCTTTATGAATCGCCTTCACAGTCTGTCAGAGAGAAAGCGGTCGCCCTCTTGGAGGAATTCGGCTCCATCCGCT ATGCGGACAGGAGATATGAAACGCTCTCCCAGGGAGAAAAGCAAAAGGTGCTGATCGCAAGGGCCTTGATGGCCGATCCT GAGCTGCTGATTCTCGACGAACCTGTCACCGGTCTAGATTTTATCGCGAGGGAGCAGGTGCTGGATACGGTTGAACAAAT TGCCAAGAAAGACAGTGCGCCGTCCATGCTTTACGTTACTCACCATGCAGAAGAAATTCTCCCCGCTTTCAGCCAAACCC TGCTGTTAAAAAAAGGGGAAGTGTTTGCGTTGGGAAAGACAAGAGAGATGATGTCCGGCGAGGTTCTGTCCGAATTTTTC GATATGCCCGTCCAGGCGGTATGGACGGAAGATCGGCCGTACTTGTCCAAGAAAAAAACTGCAAACCTCAATGTTTAA
Upstream 100 bases:
>100_bases ATGGAAAATCTCTCATTCACTTTATTAAATATATAAGCTATAATAAAAGAATTATATTTTAATTTATCAGAATATTTACA TAAAAAAAGGGGGATTTTAA
Downstream 100 bases:
>100_bases AGCTTCGGATGTGTTTGGGAGCCTCCTTCTATTATGGAGGCTCTTTTTCAGCTTTCATCATCTTAAAGAAGCTGGTAAGA TAATAAAGAACGTCATGTTT
Product: YlmA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MVLQLEHASLKRNGEWILKDIDWTVEKGEHWALYGLNGAGKTALLNMLCAYYFPTIGKVTVLGREFGKTELGEKLRRKIG LVSAALQQKLYPEDSAFEIVLSGAFASIGLYESPSQSVREKAVALLEEFGSIRYADRRYETLSQGEKQKVLIARALMADP ELLILDEPVTGLDFIAREQVLDTVEQIAKKDSAPSMLYVTHHAEEILPAFSQTLLLKKGEVFALGKTREMMSGEVLSEFF DMPVQAVWTEDRPYLSKKKTANLNV
Sequences:
>Translated_265_residues MVLQLEHASLKRNGEWILKDIDWTVEKGEHWALYGLNGAGKTALLNMLCAYYFPTIGKVTVLGREFGKTELGEKLRRKIG LVSAALQQKLYPEDSAFEIVLSGAFASIGLYESPSQSVREKAVALLEEFGSIRYADRRYETLSQGEKQKVLIARALMADP ELLILDEPVTGLDFIAREQVLDTVEQIAKKDSAPSMLYVTHHAEEILPAFSQTLLLKKGEVFALGKTREMMSGEVLSEFF DMPVQAVWTEDRPYLSKKKTANLNV >Mature_265_residues MVLQLEHASLKRNGEWILKDIDWTVEKGEHWALYGLNGAGKTALLNMLCAYYFPTIGKVTVLGREFGKTELGEKLRRKIG LVSAALQQKLYPEDSAFEIVLSGAFASIGLYESPSQSVREKAVALLEEFGSIRYADRRYETLSQGEKQKVLIARALMADP ELLILDEPVTGLDFIAREQVLDTVEQIAKKDSAPSMLYVTHHAEEILPAFSQTLLLKKGEVFALGKTREMMSGEVLSEFF DMPVQAVWTEDRPYLSKKKTANLNV
Specific function: Involved In The Transport Of Molybdenum Into The Cell. Involved In Photorepair. Could Act On Uv-Induced DNA Damage Other Than Pyrimidine Dimers. [C]
COG id: COG1119
COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI42490749, Length=256, Percent_Identity=25.78125, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI30795238, Length=247, Percent_Identity=27.5303643724696, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI27881501, Length=247, Percent_Identity=27.5303643724696, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI105990541, Length=211, Percent_Identity=28.436018957346, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI150417984, Length=209, Percent_Identity=26.7942583732057, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI27436953, Length=169, Percent_Identity=30.1775147928994, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI31657092, Length=209, Percent_Identity=25.3588516746411, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI116734710, Length=212, Percent_Identity=26.8867924528302, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI11967969, Length=233, Percent_Identity=27.0386266094421, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI171184400, Length=220, Percent_Identity=28.6363636363636, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI42741659, Length=234, Percent_Identity=26.9230769230769, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI9955963, Length=233, Percent_Identity=26.6094420600858, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI9961252, Length=239, Percent_Identity=28.0334728033473, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI4505771, Length=239, Percent_Identity=28.0334728033473, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI27262624, Length=202, Percent_Identity=23.2673267326733, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI27262626, Length=202, Percent_Identity=23.2673267326733, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI21536378, Length=224, Percent_Identity=27.6785714285714, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1786975, Length=207, Percent_Identity=33.8164251207729, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1789032, Length=221, Percent_Identity=29.4117647058824, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786319, Length=208, Percent_Identity=32.2115384615385, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1787089, Length=230, Percent_Identity=29.1304347826087, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI48994943, Length=229, Percent_Identity=31.4410480349345, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI87081709, Length=228, Percent_Identity=25.4385964912281, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1790544, Length=238, Percent_Identity=27.3109243697479, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789593, Length=230, Percent_Identity=28.2608695652174, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788225, Length=229, Percent_Identity=27.9475982532751, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1790467, Length=234, Percent_Identity=28.2051282051282, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1787370, Length=219, Percent_Identity=25.1141552511416, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786253, Length=232, Percent_Identity=27.5862068965517, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1789672, Length=206, Percent_Identity=27.6699029126214, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI87081791, Length=235, Percent_Identity=25.1063829787234, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI87082268, Length=207, Percent_Identity=28.5024154589372, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1789962, Length=187, Percent_Identity=29.9465240641711, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1786563, Length=240, Percent_Identity=30, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788761, Length=206, Percent_Identity=28.6407766990291, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87081782, Length=196, Percent_Identity=29.0816326530612, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1786345, Length=242, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1787029, Length=208, Percent_Identity=29.3269230769231, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1789864, Length=234, Percent_Identity=24.3589743589744, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789873, Length=228, Percent_Identity=27.1929824561404, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=29.0476190476191, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786872, Length=200, Percent_Identity=32, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786803, Length=219, Percent_Identity=25.1141552511416, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787792, Length=216, Percent_Identity=30.5555555555556, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1786398, Length=231, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1789891, Length=213, Percent_Identity=24.8826291079812, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1788506, Length=228, Percent_Identity=26.7543859649123, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1786703, Length=188, Percent_Identity=31.9148936170213, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786981, Length=212, Percent_Identity=31.1320754716981, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1790525, Length=222, Percent_Identity=26.1261261261261, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1790739, Length=243, Percent_Identity=24.6913580246914, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1788210, Length=202, Percent_Identity=28.7128712871287, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1788450, Length=262, Percent_Identity=24.8091603053435, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1788472, Length=233, Percent_Identity=24.4635193133047, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787112, Length=217, Percent_Identity=29.4930875576037, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787500, Length=271, Percent_Identity=26.1992619926199, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI48995001, Length=250, Percent_Identity=24.8, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1788897, Length=212, Percent_Identity=28.7735849056604, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787712, Length=211, Percent_Identity=24.1706161137441, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788165, Length=241, Percent_Identity=25.7261410788382, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787758, Length=221, Percent_Identity=22.6244343891403, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI87082267, Length=214, Percent_Identity=27.5700934579439, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1789963, Length=215, Percent_Identity=26.046511627907, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788644, Length=225, Percent_Identity=28, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787759, Length=231, Percent_Identity=25.1082251082251, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1787164, Length=208, Percent_Identity=28.8461538461538, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71983510, Length=213, Percent_Identity=29.1079812206573, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI71983516, Length=213, Percent_Identity=29.1079812206573, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI71983523, Length=213, Percent_Identity=29.1079812206573, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI193202349, Length=234, Percent_Identity=28.2051282051282, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193211017, Length=238, Percent_Identity=26.890756302521, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI193211015, Length=238, Percent_Identity=26.890756302521, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI71992290, Length=228, Percent_Identity=29.3859649122807, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71996809, Length=238, Percent_Identity=26.890756302521, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI115534520, Length=244, Percent_Identity=28.2786885245902, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI115533608, Length=225, Percent_Identity=28, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI115533592, Length=231, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17541710, Length=242, Percent_Identity=26.4462809917355, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17558664, Length=227, Percent_Identity=27.7533039647577, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17555318, Length=235, Percent_Identity=28.0851063829787, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17565938, Length=235, Percent_Identity=24.6808510638298, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI25146777, Length=234, Percent_Identity=26.4957264957265, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI193208177, Length=237, Percent_Identity=25.7383966244726, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71996550, Length=203, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=231, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323217, Length=229, Percent_Identity=27.0742358078603, Blast_Score=69, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6320266, Length=234, Percent_Identity=26.4957264957265, Blast_Score=69, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6322640, Length=222, Percent_Identity=24.3243243243243, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6321752, Length=249, Percent_Identity=21.6867469879518, Blast_Score=63, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6319856, Length=221, Percent_Identity=27.1493212669683, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI24650853, Length=213, Percent_Identity=30.0469483568075, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24650855, Length=213, Percent_Identity=30.0469483568075, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI281362751, Length=213, Percent_Identity=29.5774647887324, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24582014, Length=197, Percent_Identity=30.4568527918782, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24582012, Length=197, Percent_Identity=30.4568527918782, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI281363262, Length=223, Percent_Identity=28.6995515695067, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24653245, Length=223, Percent_Identity=28.6995515695067, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI85726357, Length=248, Percent_Identity=26.2096774193548, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24643674, Length=213, Percent_Identity=26.2910798122066, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24666092, Length=217, Percent_Identity=24.8847926267281, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI28571871, Length=228, Percent_Identity=27.1929824561404, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI23397593, Length=226, Percent_Identity=28.3185840707965, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI85725262, Length=213, Percent_Identity=29.1079812206573, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI17136662, Length=221, Percent_Identity=26.2443438914027, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI28574150, Length=223, Percent_Identity=26.457399103139, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI116007328, Length=223, Percent_Identity=26.457399103139, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641565, Length=220, Percent_Identity=27.7272727272727, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI221512771, Length=219, Percent_Identity=26.9406392694064, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 29717; Mature: 29717
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLQLEHASLKRNGEWILKDIDWTVEKGEHWALYGLNGAGKTALLNMLCAYYFPTIGKVT CEEEECHHHHCCCCCEEEEECCEEEECCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEE VLGREFGKTELGEKLRRKIGLVSAALQQKLYPEDSAFEIVLSGAFASIGLYESPSQSVRE EEHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCCCCCCCHHHHHH KAVALLEEFGSIRYADRRYETLSQGEKQKVLIARALMADPELLILDEPVTGLDFIAREQV HHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH LDTVEQIAKKDSAPSMLYVTHHAEEILPAFSQTLLLKKGEVFALGKTREMMSGEVLSEFF HHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHH DMPVQAVWTEDRPYLSKKKTANLNV CCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MVLQLEHASLKRNGEWILKDIDWTVEKGEHWALYGLNGAGKTALLNMLCAYYFPTIGKVT CEEEECHHHHCCCCCEEEEECCEEEECCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEE VLGREFGKTELGEKLRRKIGLVSAALQQKLYPEDSAFEIVLSGAFASIGLYESPSQSVRE EEHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCCCCCCCHHHHHH KAVALLEEFGSIRYADRRYETLSQGEKQKVLIARALMADPELLILDEPVTGLDFIAREQV HHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH LDTVEQIAKKDSAPSMLYVTHHAEEILPAFSQTLLLKKGEVFALGKTREMMSGEVLSEFF HHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHH DMPVQAVWTEDRPYLSKKKTANLNV CCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]