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The map label for this gene is ylbF [H]

Identifier: 52785476

GI number: 52785476

Start: 1672785

End: 1673234

Strand: Direct

Name: ylbF [H]

Synonym: BLi01716

Alternate gene names: 52785476

Gene position: 1672785-1673234 (Clockwise)

Preceding gene: 52785475

Following gene: 52785477

Centisome position: 39.61

GC content: 44.89

Gene sequence:

>450_bases
ATGTTTGCCACAATGGAATCGTTGCGGCTTCAAAATGAAGCATATGATTTGGCCAACATGATTCTTCAATCAGAGGCGGC
TGAACATTACAGAAAATGCTACAAGCGTCTCCGCGAAGATGAAGAGGCCGGACGTATTATCGCTTCGTTTACGAAAATAA
AAGAACAGTACGAGGATGTGCAGCGCTTTGGCAAGTATCATCCTGATTATAAAGAGATATCCAAGAAAATGAGGGAAATC
AAACGGGAGCTTGACCTTCACGATACAGTAGCCGAATTTAAAAAGGCGGAAACCGAGCTGCAATCCATTCTTGATGAAGT
CAGCGTGGAAATCGGTCATGCTGTGTCAAAACATATCAAAGTACCGACTGGAAACCCTTATTTTGATAATCTTTCATCTT
GCGGCGGCGGCTGCGGGTCAGGCGGAAGCTGCGGCTGTAAAGTTTCCTGA

Upstream 100 bases:

>100_bases
TTGTGAAAGCGAAGTTTTTGGAAAATTATAGTTCGGAGGCGGCATAGACATTTTTGAAAACGGCTGTTTTGTGATACACT
ATAGCTGGAGGTGCATGTCT

Downstream 100 bases:

>100_bases
TGAGGCTCGGTCGCCCCGAGTCTCGTTTTTTTATAGAACTTCATGCACAGAGCGACAGGCAGGTGAACAATTTGGAAATC
AGGCGTCAAGGTTTAATCGT

Product: YlbF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MFATMESLRLQNEAYDLANMILQSEAAEHYRKCYKRLREDEEAGRIIASFTKIKEQYEDVQRFGKYHPDYKEISKKMREI
KRELDLHDTVAEFKKAETELQSILDEVSVEIGHAVSKHIKVPTGNPYFDNLSSCGGGCGSGGSCGCKVS

Sequences:

>Translated_149_residues
MFATMESLRLQNEAYDLANMILQSEAAEHYRKCYKRLREDEEAGRIIASFTKIKEQYEDVQRFGKYHPDYKEISKKMREI
KRELDLHDTVAEFKKAETELQSILDEVSVEIGHAVSKHIKVPTGNPYFDNLSSCGGGCGSGGSCGCKVS
>Mature_149_residues
MFATMESLRLQNEAYDLANMILQSEAAEHYRKCYKRLREDEEAGRIIASFTKIKEQYEDVQRFGKYHPDYKEISKKMREI
KRELDLHDTVAEFKKAETELQSILDEVSVEIGHAVSKHIKVPTGNPYFDNLSSCGGGCGSGGSCGCKVS

Specific function: Regulates sporulation prior to stage II. Positively controls the competence regulator ComK at a post-transcriptional level. May modulate the translation, stability or activity of ComS. May work together with YmcA to regulate community development [H]

COG id: COG3679

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010368 [H]

Pfam domain/function: PF06133 DUF964 [H]

EC number: NA

Molecular weight: Translated: 16903; Mature: 16903

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFATMESLRLQNEAYDLANMILQSEAAEHYRKCYKRLREDEEAGRIIASFTKIKEQYEDV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
QRFGKYHPDYKEISKKMREIKRELDLHDTVAEFKKAETELQSILDEVSVEIGHAVSKHIK
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VPTGNPYFDNLSSCGGGCGSGGSCGCKVS
CCCCCCCHHCHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFATMESLRLQNEAYDLANMILQSEAAEHYRKCYKRLREDEEAGRIIASFTKIKEQYEDV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
QRFGKYHPDYKEISKKMREIKRELDLHDTVAEFKKAETELQSILDEVSVEIGHAVSKHIK
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VPTGNPYFDNLSSCGGGCGSGGSCGCKVS
CCCCCCCHHCHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10712692 [H]