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The map label for this gene is ctaF [H]

Identifier: 52785469

GI number: 52785469

Start: 1668228

End: 1668557

Strand: Direct

Name: ctaF [H]

Synonym: BLi01709

Alternate gene names: 52785469

Gene position: 1668228-1668557 (Clockwise)

Preceding gene: 52785468

Following gene: 52785470

Centisome position: 39.51

GC content: 46.67

Gene sequence:

>330_bases
ATGGTGAATAACGAAAACAGAGGGAATCCCAAAACAGATCTTGCCTACCGCAAAAAGAAAAACGCGGAGGACATGAGATA
TCAGGTTATTTCATTCGGTTTGATGATCGGCCTGACCATTGTCGCTTTTTTAACGGTCGCCTCAGATGCCGGCGTATGGT
TTACGGTGCCGTTTATTCTGCTGCTCGCCGTCATTCAGGTTGCGTTTCAGCTGTATTACTTTATGCATATGAGTCAGCGG
GGGCATGAAGCGCCGACTTTGTTCCTTTATTCGGGCGTTTTGGTCGCTTTTGTTACCGTGTTGGCTTTTGTAACGCTAAT
CTGGTGGTAA

Upstream 100 bases:

>100_bases
CGCCGAAGTTTTTTGTCGCAAGCCTCTACTGGCATTTTATCGACGTTGTCTGGGTGTTTATCTTTACCGTTGTATACTTG
ATGGGGATGGTGGGATAAAA

Downstream 100 bases:

>100_bases
TCGAACCGACATACAGAAAGGAGGATGCTCATGTTGGGCAGCCTTGAAATATTCGGTTTTCGCGCCCTTTGGAGCCCCTA
TTTCCTAGGGGCTGTCGTTT

Product: CtaF

Products: NA

Alternate protein names: Caa-3605 subunit 4B; Cytochrome aa3 subunit 4B; Cytochrome c oxidase polypeptide IVB [H]

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MVNNENRGNPKTDLAYRKKKNAEDMRYQVISFGLMIGLTIVAFLTVASDAGVWFTVPFILLLAVIQVAFQLYYFMHMSQR
GHEAPTLFLYSGVLVAFVTVLAFVTLIWW

Sequences:

>Translated_109_residues
MVNNENRGNPKTDLAYRKKKNAEDMRYQVISFGLMIGLTIVAFLTVASDAGVWFTVPFILLLAVIQVAFQLYYFMHMSQR
GHEAPTLFLYSGVLVAFVTVLAFVTLIWW
>Mature_109_residues
MVNNENRGNPKTDLAYRKKKNAEDMRYQVISFGLMIGLTIVAFLTVASDAGVWFTVPFILLLAVIQVAFQLYYFMHMSQR
GHEAPTLFLYSGVLVAFVTVLAFVTLIWW

Specific function: Unknown

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014257
- InterPro:   IPR005171 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 12440; Mature: 12440

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNNENRGNPKTDLAYRKKKNAEDMRYQVISFGLMIGLTIVAFLTVASDAGVWFTVPFIL
CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LLAVIQVAFQLYYFMHMSQRGHEAPTLFLYSGVLVAFVTVLAFVTLIWW
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVNNENRGNPKTDLAYRKKKNAEDMRYQVISFGLMIGLTIVAFLTVASDAGVWFTVPFIL
CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LLAVIQVAFQLYYFMHMSQRGHEAPTLFLYSGVLVAFVTVLAFVTLIWW
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1847686; 9384377 [H]