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The map label for this gene is ctaD [H]

Identifier: 52785467

GI number: 52785467

Start: 1665734

End: 1667602

Strand: Direct

Name: ctaD [H]

Synonym: BLi01707

Alternate gene names: 52785467

Gene position: 1665734-1667602 (Clockwise)

Preceding gene: 52785466

Following gene: 52785468

Centisome position: 39.45

GC content: 51.15

Gene sequence:

>1869_bases
GTGAGTACGCTTAAGAAAAAGCAAGGTTTTGGGGCTGTATTATGGGACTATTTAACGACTGTCGATCATAAAAAGATTGC
CATCCTTTATTTGCTGGGCGGCGGGTTCTTCTTTGTGCTCGGCGGAATCGAAGCGATGCTGATCAGGGTTCAGCTGATGA
TACCGAACAATGACATCATGAGCGGCGGGGTCTACAATGAAATCATGACGATGCACGGCACAACGATGATTTTCCTGGCG
GCGATGCCGCTGTTGTTCGCATTGATGAACGCCGTCGTTCCGCTGCAGATAGGCGCGCGGGATGTCGCGTTTCCATTCTT
GAACTCGCTCGGCTTCTGGCTGTTTCTTTTCGGCGGCATCTTTCTGAATTTAAGCTGGTTTTTGGGAGGGGCACCCGATG
CCGGCTGGACGTCTTATGCGTCGCTTTCCCTTCATTCCGAAGGGCACGGGATCGATTTCTATGTTCTCGGTCTGCAAATT
GCCGGGATCGGTACGCTGATTGCCGGGATTAACTTTCTCGCGACGATCATCAACATGAGGGCGCCGGGCATGACATACAT
GAGGCTGCCGCTTTTCACATGGACGACATTCGTCGCTTCGGCTTTGATTTTGTTCGCGTTTCCGCCGCTGACCGTAGGCA
TTGCGCTCTTGATGCTGGACCGGTTGTTCGGAACGAGCTTTTTCAATCCGGAATTAGGCGGAAATACGATCATTTGGGAG
CATCTGTTCTGGATTTTCGGACACCCTGAAGTTTATATTCTCGTACTCCCGGCGTTCGGCATTTTTTCGGAAATCATTCC
GGTTTTTGCGAGAAAAAGGCTGTTCGGCTATTCTTCAATGGTATTTGCAACCGTATTGATCGGCTTTTTAGGCTTCATGG
TTTGGGCTCACCATATGTTTACAACGGGACTCGGGCCTGTGGCAAACGCCATTTTTGCGGTGGCGACGATGGCCATTGCC
GTCCCGACTGGTATTAAAATCTTCAACTGGCTGCTCACGGCGTGGGGCGGGAGCATCAAGTTTACAACGCCGATGCTTTA
CGCGATATCCTTTATCCCGACGTTTGTTATGGGCGGGGTGACAGGCGTCATGCTTGCTGCCGCACCGGCTGACTATCAGT
TCCATGACACGTACTTTGTCGTGGCCCACTTCCATTACGTCATCATCGGCGGAGTGGTGTTCGCCATCCTCGCCGGAGCT
CATTACTGGTGGCCGAAAATGTTCGGGAAAATGCTGAGCGAAGCGTTGGGCAAAATAACGTTTGTACTCTTTTTCATCGG
GTTCCACCTGACGTTCTTCATCCAGCATTGGCTCGGATTGTGGGGAATGCCGAGACGCGTGTTCACATACTTGCCGAATC
AGGGATTTGACATGGCGAACCTGATCAGTTCAATCGGAGCTGTGTTTATGGCGGCTGCGGTCATCATACTCGTGATCAAT
ATTATCGTGACGACTGCCAAAGGGGAAAAAGTCGGCAGCGATCCTTGGCATGACGGAAGAACGCTTGAGTGGGCCGTTTC
TTCGCCGCCTCCTGAATACAACTTCAAACAGCTGCCTTTGGTCAGAGGCCTTGATGCTTTATGGATCGAAAAAAGAGCCG
GCAAGCAGTCAATGACCGCCGCGGAGCCGCTTCAGGACATCCATATGCCAAACGGATCGATTCTTCCGTTCATCATGTCA
CTCGGGCTGTTTATATCCGCCTTCGGCTTTATGTACCGGACGGAATTTGCCTGGGGGCTGCCTGTCATTCTGATCGGGTT
AGGGATCACGTTATTTATGATGCTTCTCCGGTCTGTAATTGATGACCACGGGTACCATATTCATAAAGAAGATCTGATGG
ATGATGACGACAAAGGGGTGAAGGCATAA

Upstream 100 bases:

>100_bases
CTGATTTGAGCGACAAGGAACTTGATGCACTGACTGAATATTTAAAGGGGTTAAAAACCGAAGACTAACGCTTCAAAGGG
AGAATGAGGGAGGTTACATT

Downstream 100 bases:

>100_bases
TGCATACAGAAGAGAAATTGACGGCTGAAACCTTCCCGGCTTCTCCTGAAAAAGCTACGTTAGAAGGAAAAAATAAATTT
ATCGGCTTTTGGCTATTTCT

Product: CtaD

Products: NA

Alternate protein names: Caa-3605 subunit 1; Cytochrome aa3 subunit 1; Cytochrome c oxidase polypeptide I; Oxidase aa(3) subunit 1 [H]

Number of amino acids: Translated: 622; Mature: 621

Protein sequence:

>622_residues
MSTLKKKQGFGAVLWDYLTTVDHKKIAILYLLGGGFFFVLGGIEAMLIRVQLMIPNNDIMSGGVYNEIMTMHGTTMIFLA
AMPLLFALMNAVVPLQIGARDVAFPFLNSLGFWLFLFGGIFLNLSWFLGGAPDAGWTSYASLSLHSEGHGIDFYVLGLQI
AGIGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGIALLMLDRLFGTSFFNPELGGNTIIWE
HLFWIFGHPEVYILVLPAFGIFSEIIPVFARKRLFGYSSMVFATVLIGFLGFMVWAHHMFTTGLGPVANAIFAVATMAIA
VPTGIKIFNWLLTAWGGSIKFTTPMLYAISFIPTFVMGGVTGVMLAAAPADYQFHDTYFVVAHFHYVIIGGVVFAILAGA
HYWWPKMFGKMLSEALGKITFVLFFIGFHLTFFIQHWLGLWGMPRRVFTYLPNQGFDMANLISSIGAVFMAAAVIILVIN
IIVTTAKGEKVGSDPWHDGRTLEWAVSSPPPEYNFKQLPLVRGLDALWIEKRAGKQSMTAAEPLQDIHMPNGSILPFIMS
LGLFISAFGFMYRTEFAWGLPVILIGLGITLFMMLLRSVIDDHGYHIHKEDLMDDDDKGVKA

Sequences:

>Translated_622_residues
MSTLKKKQGFGAVLWDYLTTVDHKKIAILYLLGGGFFFVLGGIEAMLIRVQLMIPNNDIMSGGVYNEIMTMHGTTMIFLA
AMPLLFALMNAVVPLQIGARDVAFPFLNSLGFWLFLFGGIFLNLSWFLGGAPDAGWTSYASLSLHSEGHGIDFYVLGLQI
AGIGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGIALLMLDRLFGTSFFNPELGGNTIIWE
HLFWIFGHPEVYILVLPAFGIFSEIIPVFARKRLFGYSSMVFATVLIGFLGFMVWAHHMFTTGLGPVANAIFAVATMAIA
VPTGIKIFNWLLTAWGGSIKFTTPMLYAISFIPTFVMGGVTGVMLAAAPADYQFHDTYFVVAHFHYVIIGGVVFAILAGA
HYWWPKMFGKMLSEALGKITFVLFFIGFHLTFFIQHWLGLWGMPRRVFTYLPNQGFDMANLISSIGAVFMAAAVIILVIN
IIVTTAKGEKVGSDPWHDGRTLEWAVSSPPPEYNFKQLPLVRGLDALWIEKRAGKQSMTAAEPLQDIHMPNGSILPFIMS
LGLFISAFGFMYRTEFAWGLPVILIGLGITLFMMLLRSVIDDHGYHIHKEDLMDDDDKGVKA
>Mature_621_residues
STLKKKQGFGAVLWDYLTTVDHKKIAILYLLGGGFFFVLGGIEAMLIRVQLMIPNNDIMSGGVYNEIMTMHGTTMIFLAA
MPLLFALMNAVVPLQIGARDVAFPFLNSLGFWLFLFGGIFLNLSWFLGGAPDAGWTSYASLSLHSEGHGIDFYVLGLQIA
GIGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGIALLMLDRLFGTSFFNPELGGNTIIWEH
LFWIFGHPEVYILVLPAFGIFSEIIPVFARKRLFGYSSMVFATVLIGFLGFMVWAHHMFTTGLGPVANAIFAVATMAIAV
PTGIKIFNWLLTAWGGSIKFTTPMLYAISFIPTFVMGGVTGVMLAAAPADYQFHDTYFVVAHFHYVIIGGVVFAILAGAH
YWWPKMFGKMLSEALGKITFVLFFIGFHLTFFIQHWLGLWGMPRRVFTYLPNQGFDMANLISSIGAVFMAAAVIILVINI
IVTTAKGEKVGSDPWHDGRTLEWAVSSPPPEYNFKQLPLVRGLDALWIEKRAGKQSMTAAEPLQDIHMPNGSILPFIMSL
GLFISAFGFMYRTEFAWGLPVILIGLGITLFMMLLRSVIDDHGYHIHKEDLMDDDDKGVKA

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG0843

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

Organism=Homo sapiens, GI251831109, Length=507, Percent_Identity=42.8007889546351, Blast_Score=374, Evalue=1e-103,
Organism=Escherichia coli, GI1786634, Length=615, Percent_Identity=44.2276422764228, Blast_Score=491, Evalue=1e-140,
Organism=Saccharomyces cerevisiae, GI6226519, Length=472, Percent_Identity=44.4915254237288, Blast_Score=367, Evalue=1e-102,
Organism=Saccharomyces cerevisiae, GI6226524, Length=325, Percent_Identity=42.1538461538462, Blast_Score=247, Evalue=3e-66,
Organism=Saccharomyces cerevisiae, GI6226523, Length=245, Percent_Identity=37.1428571428571, Blast_Score=141, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000883
- InterPro:   IPR014241 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 68849; Mature: 68717

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLKKKQGFGAVLWDYLTTVDHKKIAILYLLGGGFFFVLGGIEAMLIRVQLMIPNNDIM
CCCCCHHCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHEEEEEECCCCCC
SGGVYNEIMTMHGTTMIFLAAMPLLFALMNAVVPLQIGARDVAFPFLNSLGFWLFLFGGI
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEHCCCCHHHHHHHHHHHHHHHHHHHHH
FLNLSWFLGGAPDAGWTSYASLSLHSEGHGIDFYVLGLQIAGIGTLIAGINFLATIINMR
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHC
APGMTYMRLPLFTWTTFVASALILFAFPPLTVGIALLMLDRLFGTSFFNPELGGNTIIWE
CCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHH
HLFWIFGHPEVYILVLPAFGIFSEIIPVFARKRLFGYSSMVFATVLIGFLGFMVWAHHMF
HHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
TTGLGPVANAIFAVATMAIAVPTGIKIFNWLLTAWGGSIKFTTPMLYAISFIPTFVMGGV
HHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH
TGVMLAAAPADYQFHDTYFVVAHFHYVIIGGVVFAILAGAHYWWPKMFGKMLSEALGKIT
HHHHHHCCCCCCEECCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FVLFFIGFHLTFFIQHWLGLWGMPRRVFTYLPNQGFDMANLISSIGAVFMAAAVIILVIN
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IIVTTAKGEKVGSDPWHDGRTLEWAVSSPPPEYNFKQLPLVRGLDALWIEKRAGKQSMTA
HHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCHH
AEPLQDIHMPNGSILPFIMSLGLFISAFGFMYRTEFAWGLPVILIGLGITLFMMLLRSVI
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
DDHGYHIHKEDLMDDDDKGVKA
HCCCCEEEHHHCCCCCCCCCCC
>Mature Secondary Structure 
STLKKKQGFGAVLWDYLTTVDHKKIAILYLLGGGFFFVLGGIEAMLIRVQLMIPNNDIM
CCCCHHCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHEEEEEECCCCCC
SGGVYNEIMTMHGTTMIFLAAMPLLFALMNAVVPLQIGARDVAFPFLNSLGFWLFLFGGI
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEHCCCCHHHHHHHHHHHHHHHHHHHHH
FLNLSWFLGGAPDAGWTSYASLSLHSEGHGIDFYVLGLQIAGIGTLIAGINFLATIINMR
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHC
APGMTYMRLPLFTWTTFVASALILFAFPPLTVGIALLMLDRLFGTSFFNPELGGNTIIWE
CCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHH
HLFWIFGHPEVYILVLPAFGIFSEIIPVFARKRLFGYSSMVFATVLIGFLGFMVWAHHMF
HHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
TTGLGPVANAIFAVATMAIAVPTGIKIFNWLLTAWGGSIKFTTPMLYAISFIPTFVMGGV
HHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH
TGVMLAAAPADYQFHDTYFVVAHFHYVIIGGVVFAILAGAHYWWPKMFGKMLSEALGKIT
HHHHHHCCCCCCEECCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FVLFFIGFHLTFFIQHWLGLWGMPRRVFTYLPNQGFDMANLISSIGAVFMAAAVIILVIN
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IIVTTAKGEKVGSDPWHDGRTLEWAVSSPPPEYNFKQLPLVRGLDALWIEKRAGKQSMTA
HHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCHH
AEPLQDIHMPNGSILPFIMSLGLFISAFGFMYRTEFAWGLPVILIGLGITLFMMLLRSVI
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
DDHGYHIHKEDLMDDDDKGVKA
HCCCCEEEHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1847686; 9384377 [H]