Click here to switch to the map view.

The map label for this gene is ykuQ [H]

Identifier: 52785393

GI number: 52785393

Start: 1594030

End: 1594740

Strand: Direct

Name: ykuQ [H]

Synonym: BLi01632

Alternate gene names: 52785393

Gene position: 1594030-1594740 (Clockwise)

Preceding gene: 52785392

Following gene: 52785394

Centisome position: 37.75

GC content: 47.96

Gene sequence:

>711_bases
ATGAAAATGATGGATGCAAATGAGATTATCTCATTTATTCAAAATAGTAAGAAATCGACACCTGTTAAAGTGTATGTGAA
AGGCGACCTTGAAGGAATTGACTTCGGCGCTTCAGCCAAGCCTTTTATTACAGGCAATACAGGGGTTGTATTCGGAGAAT
GGGCGGAGATTCAAGCTGCGCTCGAAGCCAACAAAGGCAAAATTGAAGACTATGTCATCGAAAACGACCGCCGCAATTCG
GCGATTCCAACGCTCGATTTAAAAAATATTAAAGCGCGCATCGAGCCGGGTGCGATCATCCGCGATCAAGTGGAAATCGG
CGATAATGCCGTCATCATGATGGGGGCTTCCATCAACATCGGCTCTGTGATCGGAGAAGGAACGATGATCGATATGAATG
TCGTGCTGGGCGGACGAGCTACCGTCGGCAAAAACTGCCACATCGGAGCGGGATCCGTGCTTGCGGGTGTCATTGAGCCT
CCTTCAGCAAAACCTGTCGTTATTGAAGACGATGTCGTCATCGGTGCAAACGCCGTCGTACTTGAAGGCGTGACTGTCGG
AAAAGGAGCCGTTGTTGCTGCCGGCGCGATCGTTGTGGAAGATGTTGAGCCTTACACAGTAGTCGCCGGAACACCTGCGA
AAAAAATCAAAGACATCGATGAAAAAACTAAAGGCAAAACAGAAATCAAACAGGAATTGCGCCAGCTTTAA

Upstream 100 bases:

>100_bases
GATAAAAAAGGAAACGGGACATCCCTTTCCTTTTTTTCTTGTTTTTAAATCTTTCCTTTGATACAGTAATGAGGAGAAAA
AGAGAAGGAGGACTTACATA

Downstream 100 bases:

>100_bases
GAAGCGGCAGCGAAAAGTGCGTGGATGTGACAATCCACGCATTTTCGCATCGCCGGGGAGGTTAGAAAGATGAAATTGGA
CGAATTAGCAGCGATTCGCA

Product: YkuQ

Products: NA

Alternate protein names: Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase [H]

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKMMDANEIISFIQNSKKSTPVKVYVKGDLEGIDFGASAKPFITGNTGVVFGEWAEIQAALEANKGKIEDYVIENDRRNS
AIPTLDLKNIKARIEPGAIIRDQVEIGDNAVIMMGASINIGSVIGEGTMIDMNVVLGGRATVGKNCHIGAGSVLAGVIEP
PSAKPVVIEDDVVIGANAVVLEGVTVGKGAVVAAGAIVVEDVEPYTVVAGTPAKKIKDIDEKTKGKTEIKQELRQL

Sequences:

>Translated_236_residues
MKMMDANEIISFIQNSKKSTPVKVYVKGDLEGIDFGASAKPFITGNTGVVFGEWAEIQAALEANKGKIEDYVIENDRRNS
AIPTLDLKNIKARIEPGAIIRDQVEIGDNAVIMMGASINIGSVIGEGTMIDMNVVLGGRATVGKNCHIGAGSVLAGVIEP
PSAKPVVIEDDVVIGANAVVLEGVTVGKGAVVAAGAIVVEDVEPYTVVAGTPAKKIKDIDEKTKGKTEIKQELRQL
>Mature_236_residues
MKMMDANEIISFIQNSKKSTPVKVYVKGDLEGIDFGASAKPFITGNTGVVFGEWAEIQAALEANKGKIEDYVIENDRRNS
AIPTLDLKNIKARIEPGAIIRDQVEIGDNAVIMMGASINIGSVIGEGTMIDMNVVLGGRATVGKNCHIGAGSVLAGVIEP
PSAKPVVIEDDVVIGANAVVLEGVTVGKGAVVAAGAIVVEDVEPYTVVAGTPAKKIKDIDEKTKGKTEIKQELRQL

Specific function: Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate [H]

COG id: COG2171

COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family. DapH subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786362, Length=174, Percent_Identity=32.183908045977, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013710
- InterPro:   IPR018357
- InterPro:   IPR019873
- InterPro:   IPR011004 [H]

Pfam domain/function: PF08503 DapD_N [H]

EC number: =2.3.1.89 [H]

Molecular weight: Translated: 24795; Mature: 24795

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMMDANEIISFIQNSKKSTPVKVYVKGDLEGIDFGASAKPFITGNTGVVFGEWAEIQAA
CCCCCHHHHHHHHHCCCCCCCEEEEEECCCCEECCCCCCCCEEECCCCEEEECHHHHHEE
LEANKGKIEDYVIENDRRNSAIPTLDLKNIKARIEPGAIIRDQVEIGDNAVIMMGASINI
HHCCCCCCEEEEEECCCCCCCCCEEECCCCEEECCCCCEEEEEEEECCCEEEEEECCCCC
GSVIGEGTMIDMNVVLGGRATVGKNCHIGAGSVLAGVIEPPSAKPVVIEDDVVIGANAVV
CCEECCCEEEEEEEEECCCEECCCCCCCCCCHHEEEEECCCCCCCEEEECCEEECCCEEE
LEGVTVGKGAVVAAGAIVVEDVEPYTVVAGTPAKKIKDIDEKTKGKTEIKQELRQL
EECEEECCCCEEEECEEEEECCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MKMMDANEIISFIQNSKKSTPVKVYVKGDLEGIDFGASAKPFITGNTGVVFGEWAEIQAA
CCCCCHHHHHHHHHCCCCCCCEEEEEECCCCEECCCCCCCCEEECCCCEEEECHHHHHEE
LEANKGKIEDYVIENDRRNSAIPTLDLKNIKARIEPGAIIRDQVEIGDNAVIMMGASINI
HHCCCCCCEEEEEECCCCCCCCCEEECCCCEEECCCCCEEEEEEEECCCEEEEEECCCCC
GSVIGEGTMIDMNVVLGGRATVGKNCHIGAGSVLAGVIEPPSAKPVVIEDDVVIGANAVV
CCEECCCEEEEEEEEECCCEECCCCCCCCCCHHEEEEECCCCCCCEEEECCEEECCCEEE
LEGVTVGKGAVVAAGAIVVEDVEPYTVVAGTPAKKIKDIDEKTKGKTEIKQELRQL
EECEEECCCCEEEECEEEEECCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA