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The map label for this gene is glpQ [H]

Identifier: 52785330

GI number: 52785330

Start: 1536631

End: 1537458

Strand: Direct

Name: glpQ [H]

Synonym: BLi01566

Alternate gene names: 52785330

Gene position: 1536631-1537458 (Clockwise)

Preceding gene: 52785329

Following gene: 52785331

Centisome position: 36.39

GC content: 38.53

Gene sequence:

>828_bases
ATGAGAAAATTATTTTTTATATCGCTAGTTATTATGCTTTTTCTTAGTGTGAATGTTGGGTGTAGCAACGTCGATGCTAC
AACAAGCAAATCGATAGAGTATTCACCTCTTATAATCGCACATAGAGGAGCTTCGGAGCTGGAGCCTGAACATACAATCA
GATCTTATTCGAGAGCAATTAAGGACGGGACCGATTTCATTGAGATCGATCTAAGGGTGACGAAAGACGGAAAACTAGTC
GCTTTTCACGATGAAGACGTGTCCCGTACAACAGATGGAAAGGGAGACATTGAAGATTTATCGTTAAACCATGTCAAGGA
ATTGCGAACTGAAAAAGATCAACAGGTCTTAACTCTTGAAGAGATTATCAAGAAATACGGGGATTCAACGAAGTATTATA
TAGAGACTCGCGAAGATTCTAAAGGCCGTTTGGTTATGGAGAAGAAACTGATCGATATACTCAATCGCTATAATTTACTT
GAAAATAATCAAGTAATCATTCAGTCGTTTAGCGCGAAAAGTTTGAAACAAGTTAGAAAACTCAACAAAGAAGTTCCCAT
CGTACAACTTGTGCAGACTTGGGATGCGGAGAAACTGTCCGAAAGAATTAAAGACTATAAAAAATACGCGTATGCGATTG
GAATTAGTTCTCAGACGCTGTCTGACAAGGAAGTGAAAATGATTCATGACGAGAATATGGAGGTCCATACGTTCTTCCGT
GTCGAGTTAGAGAAAGAGGAAACAAAGCGAATGATTGAACTAAAAGTCGACGGTATGTTCGCTAATAACCCGGCCTATTT
AAATAAATTACTCGATGGATCAAAGTAA

Upstream 100 bases:

>100_bases
GACGGTGTAGATCAAGGATATGTTACGCCTGAGCAATTCCAAGAAATAACTGGCGAGAAGTACATTGCCTAGATGAGGAA
AAGCATGGTAATATAATCCT

Downstream 100 bases:

>100_bases
TAGCCGTCTTAGCACCTCATTCGCAGAGGTGTTTTTTATTTTGCCTAAATTTAGAGGAGGCGTAGTCATTGGGCGAGCTG
GACGTAATCAAATACTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MRKLFFISLVIMLFLSVNVGCSNVDATTSKSIEYSPLIIAHRGASELEPEHTIRSYSRAIKDGTDFIEIDLRVTKDGKLV
AFHDEDVSRTTDGKGDIEDLSLNHVKELRTEKDQQVLTLEEIIKKYGDSTKYYIETREDSKGRLVMEKKLIDILNRYNLL
ENNQVIIQSFSAKSLKQVRKLNKEVPIVQLVQTWDAEKLSERIKDYKKYAYAIGISSQTLSDKEVKMIHDENMEVHTFFR
VELEKEETKRMIELKVDGMFANNPAYLNKLLDGSK

Sequences:

>Translated_275_residues
MRKLFFISLVIMLFLSVNVGCSNVDATTSKSIEYSPLIIAHRGASELEPEHTIRSYSRAIKDGTDFIEIDLRVTKDGKLV
AFHDEDVSRTTDGKGDIEDLSLNHVKELRTEKDQQVLTLEEIIKKYGDSTKYYIETREDSKGRLVMEKKLIDILNRYNLL
ENNQVIIQSFSAKSLKQVRKLNKEVPIVQLVQTWDAEKLSERIKDYKKYAYAIGISSQTLSDKEVKMIHDENMEVHTFFR
VELEKEETKRMIELKVDGMFANNPAYLNKLLDGSK
>Mature_275_residues
MRKLFFISLVIMLFLSVNVGCSNVDATTSKSIEYSPLIIAHRGASELEPEHTIRSYSRAIKDGTDFIEIDLRVTKDGKLV
AFHDEDVSRTTDGKGDIEDLSLNHVKELRTEKDQQVLTLEEIIKKYGDSTKYYIETREDSKGRLVMEKKLIDILNRYNLL
ENNQVIIQSFSAKSLKQVRKLNKEVPIVQLVQTWDAEKLSERIKDYKKYAYAIGISSQTLSDKEVKMIHDENMEVHTFFR
VELEKEETKRMIELKVDGMFANNPAYLNKLLDGSK

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=157, Percent_Identity=29.2993630573248, Blast_Score=69, Evalue=5e-12,
Organism=Escherichia coli, GI1788572, Length=250, Percent_Identity=26.4, Blast_Score=68, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17542344, Length=202, Percent_Identity=29.2079207920792, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 31760; Mature: 31760

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLFFISLVIMLFLSVNVGCSNVDATTSKSIEYSPLIIAHRGASELEPEHTIRSYSRAI
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
KDGTDFIEIDLRVTKDGKLVAFHDEDVSRTTDGKGDIEDLSLNHVKELRTEKDQQVLTLE
HCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCEEHHH
EIIKKYGDSTKYYIETREDSKGRLVMEKKLIDILNRYNLLENNQVIIQSFSAKSLKQVRK
HHHHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHH
LNKEVPIVQLVQTWDAEKLSERIKDYKKYAYAIGISSQTLSDKEVKMIHDENMEVHTFFR
HCCCCCHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEECCCCEEEEEEE
VELEKEETKRMIELKVDGMFANNPAYLNKLLDGSK
EEECHHHHCEEEEEEECCEECCCHHHHHHHHCCCC
>Mature Secondary Structure
MRKLFFISLVIMLFLSVNVGCSNVDATTSKSIEYSPLIIAHRGASELEPEHTIRSYSRAI
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
KDGTDFIEIDLRVTKDGKLVAFHDEDVSRTTDGKGDIEDLSLNHVKELRTEKDQQVLTLE
HCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCEEHHH
EIIKKYGDSTKYYIETREDSKGRLVMEKKLIDILNRYNLLENNQVIIQSFSAKSLKQVRK
HHHHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHH
LNKEVPIVQLVQTWDAEKLSERIKDYKKYAYAIGISSQTLSDKEVKMIHDENMEVHTFFR
HCCCCCHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEECCCCEEEEEEE
VELEKEETKRMIELKVDGMFANNPAYLNKLLDGSK
EEECHHHHCEEEEEEECCEECCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8012593; 9384377 [H]