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The map label for this gene is ykoX [H]

Identifier: 52785262

GI number: 52785262

Start: 1470732

End: 1471373

Strand: Direct

Name: ykoX [H]

Synonym: BLi01497

Alternate gene names: 52785262

Gene position: 1470732-1471373 (Clockwise)

Preceding gene: 52785258

Following gene: 52785263

Centisome position: 34.83

GC content: 48.44

Gene sequence:

>642_bases
GTGGTCGATATCGAAGAGTTTATTTTATCAATGGCTGAGGCATTTAAAAGCCTCTCGTATTTAGGCATTTTCCTGGCGCT
GTGCATCGAATTCGTGCCGGCTGAGATCGTTCTGCCGCTTGCCGGATACTGGGTGTATCAAGGAGATATGTCGATGTTCG
GGGTCGTTGCAGCAGGTTCACTGGGAGGTGTCGCAGGCCCTCTGACGCTTTACTGGCTCGGGAGGTACGGGGGGCGGCCG
TTTTTGGAACGCTACGGCAAATACTTCTTTATCAAGCCTGAAGCGCTTGAAAAATCGGACAGGTTTTTTGAAAAGCACGG
CGGGTTTGTCGCATTCAGCGGCCGTTTTATACCTGGAATCAGAACGCTGATTTCCATTCCGTGCGGACTCGCGAAAATGA
ATGTGTGGGTATTTTGTATTTATACATTCCTCGCGATCACGCCGATTACGTTCGTCTATGTCTATTTAGGCTTTTACCTC
GGCGAAAACTGGAGCAAGGTCGGCAGCCTATTGGACGGATACCTTCTTCCGGTCGGCATCGGGTTCATCGTTTTGTTCGT
TCTTTACCTTTGGTTGAAGGGCAGGCGGAACAAAATCAAATCGCAAAGCGTTTCAGCCTTTATAAATAAAAATAAGGATT
GA

Upstream 100 bases:

>100_bases
TTAAGGAGGACTTCCCATTTTGCTCTTCAATTTTCTCGAATTGTGTTAAAATCATTTTTGTACGTTCTTTAGAACTTGAA
ATTATCAATCGTCAAAGGTT

Downstream 100 bases:

>100_bases
CAGCCGTGCGCATATGAGGTTAATATTATCTTATAATTCAATATTTTCTTTTATCCCAAAGGGGAGTAGCGTCCGGATGT
TTAACCGGAAACAAAGTCGT

Product: YkoX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MVDIEEFILSMAEAFKSLSYLGIFLALCIEFVPAEIVLPLAGYWVYQGDMSMFGVVAAGSLGGVAGPLTLYWLGRYGGRP
FLERYGKYFFIKPEALEKSDRFFEKHGGFVAFSGRFIPGIRTLISIPCGLAKMNVWVFCIYTFLAITPITFVYVYLGFYL
GENWSKVGSLLDGYLLPVGIGFIVLFVLYLWLKGRRNKIKSQSVSAFINKNKD

Sequences:

>Translated_213_residues
MVDIEEFILSMAEAFKSLSYLGIFLALCIEFVPAEIVLPLAGYWVYQGDMSMFGVVAAGSLGGVAGPLTLYWLGRYGGRP
FLERYGKYFFIKPEALEKSDRFFEKHGGFVAFSGRFIPGIRTLISIPCGLAKMNVWVFCIYTFLAITPITFVYVYLGFYL
GENWSKVGSLLDGYLLPVGIGFIVLFVLYLWLKGRRNKIKSQSVSAFINKNKD
>Mature_213_residues
MVDIEEFILSMAEAFKSLSYLGIFLALCIEFVPAEIVLPLAGYWVYQGDMSMFGVVAAGSLGGVAGPLTLYWLGRYGGRP
FLERYGKYFFIKPEALEKSDRFFEKHGGFVAFSGRFIPGIRTLISIPCGLAKMNVWVFCIYTFLAITPITFVYVYLGFYL
GENWSKVGSLLDGYLLPVGIGFIVLFVLYLWLKGRRNKIKSQSVSAFINKNKD

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23954; Mature: 23954

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDIEEFILSMAEAFKSLSYLGIFLALCIEFVPAEIVLPLAGYWVYQGDMSMFGVVAAGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCC
LGGVAGPLTLYWLGRYGGRPFLERYGKYFFIKPEALEKSDRFFEKHGGFVAFSGRFIPGI
CCCCHHHHHHHHHHHCCCCHHHHHCCCEEEECCHHHHHHHHHHHHCCCEEEECCCCCHHH
RTLISIPCGLAKMNVWVFCIYTFLAITPITFVYVYLGFYLGENWSKVGSLLDGYLLPVGI
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GFIVLFVLYLWLKGRRNKIKSQSVSAFINKNKD
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVDIEEFILSMAEAFKSLSYLGIFLALCIEFVPAEIVLPLAGYWVYQGDMSMFGVVAAGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCC
LGGVAGPLTLYWLGRYGGRPFLERYGKYFFIKPEALEKSDRFFEKHGGFVAFSGRFIPGI
CCCCHHHHHHHHHHHCCCCHHHHHCCCEEEECCHHHHHHHHHHHHCCCEEEECCCCCHHH
RTLISIPCGLAKMNVWVFCIYTFLAITPITFVYVYLGFYLGENWSKVGSLLDGYLLPVGI
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GFIVLFVLYLWLKGRRNKIKSQSVSAFINKNKD
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]