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The map label for this gene is yesZ [H]

Identifier: 52785150

GI number: 52785150

Start: 1376273

End: 1378270

Strand: Direct

Name: yesZ [H]

Synonym: BLi01382

Alternate gene names: 52785150

Gene position: 1376273-1378270 (Clockwise)

Preceding gene: 52785149

Following gene: 52785151

Centisome position: 32.59

GC content: 51.9

Gene sequence:

>1998_bases
ATGAAGATGAACGGAAAGCTGTACCATGGCGCTTGCTTTTATCCCGAATTGTGGGATGAGGATGTGCTGGATGAAGATAT
CAGGATGATGGAGCGAATCGGGATCAATGTTGTCAGAATCGGGGAGTTTGCCTGGTCAAGGATGGAGCCTGAAAAAGGAA
GGATCGATGTCGGATTTTTTGCAGACGTCATCCGAAAGCTCCGCGACAACAAAATTGAAACGGTCATGTGCACGCCGACT
GCGACGCCGCCGATCTGGCTGACCCACGGGCACCCGGAAAGAATGCATGTGAATGAAAAAGGGGAGACGATGGGACACGG
TTCGAGGCAGCATGCCTGCACAAACCATCCCTATTTCAGAGAGCGGGCCCGGCTGATCATCAAACATATCGCCAAAGAGA
TCGGAGAACTGCCGGGATTGATCGGATGGCAGCTTGACAATGAATTCAAATGCCATGTCGCAGAATGCATATGTGAAACG
TGCCGCACATTATGGCACAAATGGCTGGAAGACCGCTATCAGACGATTGACCGTCTGAATGAGGCATGGGGTACGGGCGT
ATGGAGCGAAACGTATCAGTGCTTCGAGCAAGTCCCGCAGCCCGGACCGACCCCGTTTTTGCATAATTCTTCTTTAAGGA
CAATGTATCAGCTGTTTTCGATGGACAAGATTTCTGAATTTGCGCGTGAACAGGCTGAGGTGATCAGAGCATACTCCGAT
GCCCCGATCACCCATAATAGCAGCGTCATGTTCGGCGTTGATCATGAAGACCTTTTCAAGAGCCTTGATTTTGCCTCGTT
TGATACGTACGCCAGCCAGGAAAACAGTCAAGCCTTTTTGTTTAATTGTGATTTATGGAGAAACATCAAAAAAGGACGGC
CGTTTTGGATTATGGAGACGAGCCCTTCCTACAGCGCTTCGCTTGAAAGCTATGCGGCGCCTCATCAAAACGGCTATTTG
AAAGCTGAAGCGGTTTCTTCTTATGCTCTTGGCGGAGCCGCGTTCTGCTATTGGCTGTGGCGCCAGCAGAGAGCCGGGTC
TGAACAGCCGCACGGATCAGTGCTCAGCGCATGGGGGGAGCCTGATGTGGGATATGAAAATGTGCTCGAAGCCGAGCGGG
CAAGACGAGAGGTTGAACACATCATGCTGGCTACGGCTCCTTTGCAGGCTGAAACAGCTGTCGTCTATTCGGACCGTGCG
AAGGTGTTTTTGAAAACGGAGCCTCATCGGGGTCTTCATTACAGAACGCTGATCACCGAGTTTTATGACCGATTATTAAA
GATGGGCATTCACAGGGATGTCATTCTTGAAGGGAGCCCGCTGGACGGCTACAAACTGCTGTTTACGCCGTTTATTCATT
ATCTTCCCCCTGCTTTTATCAAAAAAGCCGAAGCATTTGCACAAAGCGGCGGCATTTGGATTGCGGGTCCGCTGACGGGC
GGAAGAACAGAGCACCATACGATTCACACTGATTGCGGATTGGGGCCTTTAGAAAAATGTTCTGGTGTTAAAACGCTGTT
TACATTCCCGATGGATGAGCGGAACTCAAGCGGAACGGCGTTTGGCGTAAAGGCGCCGCTGAGCTTGTGGAGCGCTGTTT
TTGAAGCCGGCGGCACCAAGGCTGTCGGGATGATTGAGAAAGGCCCGGCGTCAGGCAAAGCGTTCATCACGGAACACAAA
TGCGGAAAAGGCAAAATCGTCATGCTCGGGTCGATGCCGGCAGGCGAAGCGGGGGACATCATGATGAAAAAGCTGATCAG
CCATTATGCCGAAGAAGCGGGCGTTGAGCAGAAAACCGATGTCACTCCCGGAACAGTCGTCGCGCCCCGGAAAGGAGCAG
ACGGTCTTGTCTGGGTCGTGATCAATATGGACGGCAAAGGAGGCGCAGTGACACTTGACGGCAACGGAACCGATCTTTTA
TCCGGCAGGCCCGTAACCGGACGCGTAACACTCGGCCCGCACGACTACCGCGTGATTTTGTTATCAGAGAATAAATGA

Upstream 100 bases:

>100_bases
ACGACTATACACATTTTACGAAAAAAGGGGCCCGGGAAATGGCGAAGCTCGTCTCGGAGGGCATTCGAGAGCTTGGGCTG
CCGTTTGTCAAAGAGACGGT

Downstream 100 bases:

>100_bases
ATCGCCGCAGGCTCTTGCCCGCGGCTTTTTTGGTTTGTTTTGCAAAAAACGATGATTCCTGCAAAAAAGGAGTTGGCATC
CCGCTATCATAAGCAAAAAA

Product: YesZ

Products: NA

Alternate protein names: Beta-gal; Probable rhamnogalacturonan beta-galactosidase [H]

Number of amino acids: Translated: 665; Mature: 665

Protein sequence:

>665_residues
MKMNGKLYHGACFYPELWDEDVLDEDIRMMERIGINVVRIGEFAWSRMEPEKGRIDVGFFADVIRKLRDNKIETVMCTPT
ATPPIWLTHGHPERMHVNEKGETMGHGSRQHACTNHPYFRERARLIIKHIAKEIGELPGLIGWQLDNEFKCHVAECICET
CRTLWHKWLEDRYQTIDRLNEAWGTGVWSETYQCFEQVPQPGPTPFLHNSSLRTMYQLFSMDKISEFAREQAEVIRAYSD
APITHNSSVMFGVDHEDLFKSLDFASFDTYASQENSQAFLFNCDLWRNIKKGRPFWIMETSPSYSASLESYAAPHQNGYL
KAEAVSSYALGGAAFCYWLWRQQRAGSEQPHGSVLSAWGEPDVGYENVLEAERARREVEHIMLATAPLQAETAVVYSDRA
KVFLKTEPHRGLHYRTLITEFYDRLLKMGIHRDVILEGSPLDGYKLLFTPFIHYLPPAFIKKAEAFAQSGGIWIAGPLTG
GRTEHHTIHTDCGLGPLEKCSGVKTLFTFPMDERNSSGTAFGVKAPLSLWSAVFEAGGTKAVGMIEKGPASGKAFITEHK
CGKGKIVMLGSMPAGEAGDIMMKKLISHYAEEAGVEQKTDVTPGTVVAPRKGADGLVWVVINMDGKGGAVTLDGNGTDLL
SGRPVTGRVTLGPHDYRVILLSENK

Sequences:

>Translated_665_residues
MKMNGKLYHGACFYPELWDEDVLDEDIRMMERIGINVVRIGEFAWSRMEPEKGRIDVGFFADVIRKLRDNKIETVMCTPT
ATPPIWLTHGHPERMHVNEKGETMGHGSRQHACTNHPYFRERARLIIKHIAKEIGELPGLIGWQLDNEFKCHVAECICET
CRTLWHKWLEDRYQTIDRLNEAWGTGVWSETYQCFEQVPQPGPTPFLHNSSLRTMYQLFSMDKISEFAREQAEVIRAYSD
APITHNSSVMFGVDHEDLFKSLDFASFDTYASQENSQAFLFNCDLWRNIKKGRPFWIMETSPSYSASLESYAAPHQNGYL
KAEAVSSYALGGAAFCYWLWRQQRAGSEQPHGSVLSAWGEPDVGYENVLEAERARREVEHIMLATAPLQAETAVVYSDRA
KVFLKTEPHRGLHYRTLITEFYDRLLKMGIHRDVILEGSPLDGYKLLFTPFIHYLPPAFIKKAEAFAQSGGIWIAGPLTG
GRTEHHTIHTDCGLGPLEKCSGVKTLFTFPMDERNSSGTAFGVKAPLSLWSAVFEAGGTKAVGMIEKGPASGKAFITEHK
CGKGKIVMLGSMPAGEAGDIMMKKLISHYAEEAGVEQKTDVTPGTVVAPRKGADGLVWVVINMDGKGGAVTLDGNGTDLL
SGRPVTGRVTLGPHDYRVILLSENK
>Mature_665_residues
MKMNGKLYHGACFYPELWDEDVLDEDIRMMERIGINVVRIGEFAWSRMEPEKGRIDVGFFADVIRKLRDNKIETVMCTPT
ATPPIWLTHGHPERMHVNEKGETMGHGSRQHACTNHPYFRERARLIIKHIAKEIGELPGLIGWQLDNEFKCHVAECICET
CRTLWHKWLEDRYQTIDRLNEAWGTGVWSETYQCFEQVPQPGPTPFLHNSSLRTMYQLFSMDKISEFAREQAEVIRAYSD
APITHNSSVMFGVDHEDLFKSLDFASFDTYASQENSQAFLFNCDLWRNIKKGRPFWIMETSPSYSASLESYAAPHQNGYL
KAEAVSSYALGGAAFCYWLWRQQRAGSEQPHGSVLSAWGEPDVGYENVLEAERARREVEHIMLATAPLQAETAVVYSDRA
KVFLKTEPHRGLHYRTLITEFYDRLLKMGIHRDVILEGSPLDGYKLLFTPFIHYLPPAFIKKAEAFAQSGGIWIAGPLTG
GRTEHHTIHTDCGLGPLEKCSGVKTLFTFPMDERNSSGTAFGVKAPLSLWSAVFEAGGTKAVGMIEKGPASGKAFITEHK
CGKGKIVMLGSMPAGEAGDIMMKKLISHYAEEAGVEQKTDVTPGTVVAPRKGADGLVWVVINMDGKGGAVTLDGNGTDLL
SGRPVTGRVTLGPHDYRVILLSENK

Specific function: May play a role in the degradation of rhamnogalacturonan derived from plant cell walls [H]

COG id: COG1874

COG function: function code G; Beta-galactosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 42 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013739
- InterPro:   IPR013738
- InterPro:   IPR003476
- InterPro:   IPR013529
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02449 Glyco_hydro_42; PF08533 Glyco_hydro_42C; PF08532 Glyco_hydro_42M [H]

EC number: =3.2.1.23 [H]

Molecular weight: Translated: 74474; Mature: 74474

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMNGKLYHGACFYPELWDEDVLDEDIRMMERIGINVVRIGEFAWSRMEPEKGRIDVGFF
CCCCCEEEECEECCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHCCCCCCCCEEHHHH
ADVIRKLRDNKIETVMCTPTATPPIWLTHGHPERMHVNEKGETMGHGSRQHACTNHPYFR
HHHHHHHHCCCCCEEEECCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCHHH
ERARLIIKHIAKEIGELPGLIGWQLDNEFKCHVAECICETCRTLWHKWLEDRYQTIDRLN
HHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAWGTGVWSETYQCFEQVPQPGPTPFLHNSSLRTMYQLFSMDKISEFAREQAEVIRAYSD
HHHCCCCHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APITHNSSVMFGVDHEDLFKSLDFASFDTYASQENSQAFLFNCDLWRNIKKGRPFWIMET
CCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHCCCCCEEEEEC
SPSYSASLESYAAPHQNGYLKAEAVSSYALGGAAFCYWLWRQQRAGSEQPHGSVLSAWGE
CCCCHHHHHHHCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEECCCC
PDVGYENVLEAERARREVEHIMLATAPLQAETAVVYSDRAKVFLKTEPHRGLHYRTLITE
CCCCHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHH
FYDRLLKMGIHRDVILEGSPLDGYKLLFTPFIHYLPPAFIKKAEAFAQSGGIWIAGPLTG
HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCC
GRTEHHTIHTDCGLGPLEKCSGVKTLFTFPMDERNSSGTAFGVKAPLSLWSAVFEAGGTK
CCCCCCEEECCCCCCHHHHHCCCEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHCCCCE
AVGMIEKGPASGKAFITEHKCGKGKIVMLGSMPAGEAGDIMMKKLISHYAEEAGVEQKTD
EEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
VTPGTVVAPRKGADGLVWVVINMDGKGGAVTLDGNGTDLLSGRPVTGRVTLGPHDYRVIL
CCCCCEECCCCCCCCEEEEEEEECCCCCEEEECCCCCEECCCCCCEEEEEECCCCEEEEE
LSENK
EECCC
>Mature Secondary Structure
MKMNGKLYHGACFYPELWDEDVLDEDIRMMERIGINVVRIGEFAWSRMEPEKGRIDVGFF
CCCCCEEEECEECCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHCCCCCCCCEEHHHH
ADVIRKLRDNKIETVMCTPTATPPIWLTHGHPERMHVNEKGETMGHGSRQHACTNHPYFR
HHHHHHHHCCCCCEEEECCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCHHH
ERARLIIKHIAKEIGELPGLIGWQLDNEFKCHVAECICETCRTLWHKWLEDRYQTIDRLN
HHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAWGTGVWSETYQCFEQVPQPGPTPFLHNSSLRTMYQLFSMDKISEFAREQAEVIRAYSD
HHHCCCCHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APITHNSSVMFGVDHEDLFKSLDFASFDTYASQENSQAFLFNCDLWRNIKKGRPFWIMET
CCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHCCCCCEEEEEC
SPSYSASLESYAAPHQNGYLKAEAVSSYALGGAAFCYWLWRQQRAGSEQPHGSVLSAWGE
CCCCHHHHHHHCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEECCCC
PDVGYENVLEAERARREVEHIMLATAPLQAETAVVYSDRAKVFLKTEPHRGLHYRTLITE
CCCCHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHH
FYDRLLKMGIHRDVILEGSPLDGYKLLFTPFIHYLPPAFIKKAEAFAQSGGIWIAGPLTG
HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCC
GRTEHHTIHTDCGLGPLEKCSGVKTLFTFPMDERNSSGTAFGVKAPLSLWSAVFEAGGTK
CCCCCCEEECCCCCCHHHHHCCCEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHCCCCE
AVGMIEKGPASGKAFITEHKCGKGKIVMLGSMPAGEAGDIMMKKLISHYAEEAGVEQKTD
EEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
VTPGTVVAPRKGADGLVWVVINMDGKGGAVTLDGNGTDLLSGRPVTGRVTLGPHDYRVIL
CCCCCEECCCCCCCCEEEEEEEECCCCCEEEECCCCCEECCCCCCEEEEEECCCCEEEEE
LSENK
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA