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The map label for this gene is yesX [H]

Identifier: 52785147

GI number: 52785147

Start: 1372592

End: 1374478

Strand: Direct

Name: yesX [H]

Synonym: BLi01379

Alternate gene names: 52785147

Gene position: 1372592-1374478 (Clockwise)

Preceding gene: 52785146

Following gene: 52785148

Centisome position: 32.51

GC content: 53.79

Gene sequence:

>1887_bases
ATGGGAGAAAAGGACAGACATGCAGCAGCTGATCGCGTTCGTCCGGTGAAAACGGCGGCAAAACCGAAGCAAATGGAACA
CTTAAACCGCGGCCTTGTGGCGGTAAAAACAAAAAAGGGGGTTTTTCTCAGCTGGCGGCTCTTAGGAACCGATCCGGAAG
AAACCGCTTTTAATCTATACCGCAACGGACAAAGAATCAATTCAACACCCATTTCATCATCGACCAACTTTCTTGATAAA
CACGGAAATGGAAAATCGCTTTATTATGTGTCCAAGGTTCTCGGAGATAAGGAAGTCGAGACGTCGCCCAAAACAGCTGT
CTGGCAGAAGCCTTACTTGGAAGTTCCGTTAAACAAGCCTGACGGCGGGACAACTCCTGACGGCGCACCGTATACGTACA
GTGCAAATGACGCGAGCATCGGAGATCTCGACGGCGATGGAGAATACGAAATTGTGCTCAAATGGGACCCGTCAAATTCG
AAAGATAACGCGCACAACGGCTATACCGGAGAAGTCATCATCGATGCCTATAAGCTTGACGGGACATTCATGTGGAGGGT
TCATCTCGGGAAGAACATCCGCGCGGGCGCCCATTATACCCAATTGATGGTCTATGATCTTGACGGCGACGGGAAAGCGG
AAATTGCTATGAAGACGGCTGACGGAACAGTTGACGGAACCGGCCGGGTGATCGGCGATCAGGCTGCCGATTACAGAAAT
GAAGGTGGGCGAATTCTGGCCGGCCCTGAATATTTGTCGATTTTTCACGGGGAAACGGGAAGGGAATTGGCAACCGTGGA
TTACGATCCGCCGCGCGGAAGGCTTGAGGACTGGGGAGATGGATACGGCAACCGCATGGATCGGTTTTTGGCAGGCATCG
CCTATTTGGACGGCGAAAGGCCGAGCCTTGTCATGGCCCGCGGCTATTACACAAGAACGGTGCTAGTCGCTTACAACTTC
CGAGACGGCAAGCTGACCAAGCTGTGGACGTTTGACAGCGACAAGCCCGGAAATGAAGGCTATGCCGGGCAGGGAAACCA
TAGTCTGAGCGTCGCTGATGTCGACGGTGACGGGAAAGATGAGATCATCTACGGCGCGATGGCCGTTGATCATGACGGAA
CAGGGCTTTATACGACAGGGCTTGGACACGGTGATGCCATGCACGTGAGCGATCTTGACCCGGACCGGCCGGGGCTGGAA
GTCTTTCAGGTGCATGAAGATCCGCGCCTTCCGTACGGCCTCTCATTTCGCGATGCGGGTACAGGGGAAATTCTCTGGGG
AGTGCCGGCCGATACAGATGTTGGGCGGGGAATAGCCGCGCATATCGATCCCCGCTATAAAGGAGCGCTTGTCTGGGCGA
TCGATCCACCGGGCAATGAAGGAAAATCGTACGGCCTCTATACGAGTAAGGGAGAAAAGCTCAGCGATGCCGCTCCGGCT
TCGGCCAATTTTGCGATTTGGTGGGACGGCGATCTTCTCCGCGAGCTGCTTGACCACGATTGGAAAGAACCCGCAGGCAT
CCCCAAAATTGATAAATGGGACTATCACAGCGGCAGGCTGGTCAATCTGCTCACCGCTGACGGAACGCTGTCTAACAATT
GGACGAAAGGGACGCCAGTGCTTCAGGCCAATTTGTTCGGCGATTGGCGCGAAGATGTCGTGTTCCGCACAGTCCGAAGC
GATGCTCTGCGAATTTACACAACGACCGAGCCGACTGAACACCGTTTCTATACGTTCATGCACGATCCCGTCTACCGCCT
GGGGGTAGCCTGGCAAAATGTCGCTTACAATCAGCCGCCTCATCCCGGGTTTTATGTGGGAACCGGAATGGACAAGCCGC
CCCGGCCGAATATTTATACCGTTCCTTGTAAGAGAAATGAAGAATGA

Upstream 100 bases:

>100_bases
TATATCCGCTGAAACACTCGCTCAAGAAATAAGGTGTCGGGAGATCCGGTCTCCGGCTCTCCCGTTCGCCATTCCAAACC
GCAAAGGGGGAGAGAGGACT

Downstream 100 bases:

>100_bases
AAGAGAACGGCGGTTCAGCATGCGCTGGGCCCGGGGCACCGGCAGAAATATTCAACTTACAAAAAAGTATGATTGTAATC
TTACAGCCTGTTCCATAAAA

Product: YesX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 628; Mature: 627

Protein sequence:

>628_residues
MGEKDRHAAADRVRPVKTAAKPKQMEHLNRGLVAVKTKKGVFLSWRLLGTDPEETAFNLYRNGQRINSTPISSSTNFLDK
HGNGKSLYYVSKVLGDKEVETSPKTAVWQKPYLEVPLNKPDGGTTPDGAPYTYSANDASIGDLDGDGEYEIVLKWDPSNS
KDNAHNGYTGEVIIDAYKLDGTFMWRVHLGKNIRAGAHYTQLMVYDLDGDGKAEIAMKTADGTVDGTGRVIGDQAADYRN
EGGRILAGPEYLSIFHGETGRELATVDYDPPRGRLEDWGDGYGNRMDRFLAGIAYLDGERPSLVMARGYYTRTVLVAYNF
RDGKLTKLWTFDSDKPGNEGYAGQGNHSLSVADVDGDGKDEIIYGAMAVDHDGTGLYTTGLGHGDAMHVSDLDPDRPGLE
VFQVHEDPRLPYGLSFRDAGTGEILWGVPADTDVGRGIAAHIDPRYKGALVWAIDPPGNEGKSYGLYTSKGEKLSDAAPA
SANFAIWWDGDLLRELLDHDWKEPAGIPKIDKWDYHSGRLVNLLTADGTLSNNWTKGTPVLQANLFGDWREDVVFRTVRS
DALRIYTTTEPTEHRFYTFMHDPVYRLGVAWQNVAYNQPPHPGFYVGTGMDKPPRPNIYTVPCKRNEE

Sequences:

>Translated_628_residues
MGEKDRHAAADRVRPVKTAAKPKQMEHLNRGLVAVKTKKGVFLSWRLLGTDPEETAFNLYRNGQRINSTPISSSTNFLDK
HGNGKSLYYVSKVLGDKEVETSPKTAVWQKPYLEVPLNKPDGGTTPDGAPYTYSANDASIGDLDGDGEYEIVLKWDPSNS
KDNAHNGYTGEVIIDAYKLDGTFMWRVHLGKNIRAGAHYTQLMVYDLDGDGKAEIAMKTADGTVDGTGRVIGDQAADYRN
EGGRILAGPEYLSIFHGETGRELATVDYDPPRGRLEDWGDGYGNRMDRFLAGIAYLDGERPSLVMARGYYTRTVLVAYNF
RDGKLTKLWTFDSDKPGNEGYAGQGNHSLSVADVDGDGKDEIIYGAMAVDHDGTGLYTTGLGHGDAMHVSDLDPDRPGLE
VFQVHEDPRLPYGLSFRDAGTGEILWGVPADTDVGRGIAAHIDPRYKGALVWAIDPPGNEGKSYGLYTSKGEKLSDAAPA
SANFAIWWDGDLLRELLDHDWKEPAGIPKIDKWDYHSGRLVNLLTADGTLSNNWTKGTPVLQANLFGDWREDVVFRTVRS
DALRIYTTTEPTEHRFYTFMHDPVYRLGVAWQNVAYNQPPHPGFYVGTGMDKPPRPNIYTVPCKRNEE
>Mature_627_residues
GEKDRHAAADRVRPVKTAAKPKQMEHLNRGLVAVKTKKGVFLSWRLLGTDPEETAFNLYRNGQRINSTPISSSTNFLDKH
GNGKSLYYVSKVLGDKEVETSPKTAVWQKPYLEVPLNKPDGGTTPDGAPYTYSANDASIGDLDGDGEYEIVLKWDPSNSK
DNAHNGYTGEVIIDAYKLDGTFMWRVHLGKNIRAGAHYTQLMVYDLDGDGKAEIAMKTADGTVDGTGRVIGDQAADYRNE
GGRILAGPEYLSIFHGETGRELATVDYDPPRGRLEDWGDGYGNRMDRFLAGIAYLDGERPSLVMARGYYTRTVLVAYNFR
DGKLTKLWTFDSDKPGNEGYAGQGNHSLSVADVDGDGKDEIIYGAMAVDHDGTGLYTTGLGHGDAMHVSDLDPDRPGLEV
FQVHEDPRLPYGLSFRDAGTGEILWGVPADTDVGRGIAAHIDPRYKGALVWAIDPPGNEGKSYGLYTSKGEKLSDAAPAS
ANFAIWWDGDLLRELLDHDWKEPAGIPKIDKWDYHSGRLVNLLTADGTLSNNWTKGTPVLQANLFGDWREDVVFRTVRSD
ALRIYTTTEPTEHRFYTFMHDPVYRLGVAWQNVAYNQPPHPGFYVGTGMDKPPRPNIYTVPCKRNEE

Specific function: Pectinolytic enzyme that degrades type I rhamnogalacturonan from plant cell walls and releases disaccharide products. Degrades rhamnogalacturonan, polygalacturonic acid and pectic acid. Has very low activity on pectin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide lyase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013517 [H]

Pfam domain/function: PF01839 FG-GAP [H]

EC number: NA

Molecular weight: Translated: 69466; Mature: 69335

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEKDRHAAADRVRPVKTAAKPKQMEHLNRGLVAVKTKKGVFLSWRLLGTDPEETAFNLY
CCCCHHHHHHHHCCCHHHHCCCHHHHHHCCCEEEEEECCCEEEEEEEECCCHHHHHHHHH
RNGQRINSTPISSSTNFLDKHGNGKSLYYVSKVLGDKEVETSPKTAVWQKPYLEVPLNKP
HCCCEECCCCCCCCCCHHHCCCCCCEEEEEEEHHCCCCCCCCCCCEEECCCCEEECCCCC
DGGTTPDGAPYTYSANDASIGDLDGDGEYEIVLKWDPSNSKDNAHNGYTGEVIIDAYKLD
CCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEC
GTFMWRVHLGKNIRAGAHYTQLMVYDLDGDGKAEIAMKTADGTVDGTGRVIGDQAADYRN
CEEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCEEECCCCHHHHC
EGGRILAGPEYLSIFHGETGRELATVDYDPPRGRLEDWGDGYGNRMDRFLAGIAYLDGER
CCCEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCC
PSLVMARGYYTRTVLVAYNFRDGKLTKLWTFDSDKPGNEGYAGQGNHSLSVADVDGDGKD
CCEEEECCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCC
EIIYGAMAVDHDGTGLYTTGLGHGDAMHVSDLDPDRPGLEVFQVHEDPRLPYGLSFRDAG
EEEEEEEEECCCCCEEEEECCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCEECCCC
TGEILWGVPADTDVGRGIAAHIDPRYKGALVWAIDPPGNEGKSYGLYTSKGEKLSDAAPA
CCCEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCEECEEECCCCCCCCCCCC
SANFAIWWDGDLLRELLDHDWKEPAGIPKIDKWDYHSGRLVNLLTADGTLSNNWTKGTPV
CCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCE
LQANLFGDWREDVVFRTVRSDALRIYTTTEPTEHRFYTFMHDPVYRLGVAWQNVAYNQPP
EEEECCCCCHHHHHHHEECCCEEEEEECCCCCCCEEEEEECCCHHHHCEEEHHCCCCCCC
HPGFYVGTGMDKPPRPNIYTVPCKRNEE
CCCEEEECCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure 
GEKDRHAAADRVRPVKTAAKPKQMEHLNRGLVAVKTKKGVFLSWRLLGTDPEETAFNLY
CCCHHHHHHHHCCCHHHHCCCHHHHHHCCCEEEEEECCCEEEEEEEECCCHHHHHHHHH
RNGQRINSTPISSSTNFLDKHGNGKSLYYVSKVLGDKEVETSPKTAVWQKPYLEVPLNKP
HCCCEECCCCCCCCCCHHHCCCCCCEEEEEEEHHCCCCCCCCCCCEEECCCCEEECCCCC
DGGTTPDGAPYTYSANDASIGDLDGDGEYEIVLKWDPSNSKDNAHNGYTGEVIIDAYKLD
CCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEC
GTFMWRVHLGKNIRAGAHYTQLMVYDLDGDGKAEIAMKTADGTVDGTGRVIGDQAADYRN
CEEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCEEECCCCHHHHC
EGGRILAGPEYLSIFHGETGRELATVDYDPPRGRLEDWGDGYGNRMDRFLAGIAYLDGER
CCCEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCC
PSLVMARGYYTRTVLVAYNFRDGKLTKLWTFDSDKPGNEGYAGQGNHSLSVADVDGDGKD
CCEEEECCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCC
EIIYGAMAVDHDGTGLYTTGLGHGDAMHVSDLDPDRPGLEVFQVHEDPRLPYGLSFRDAG
EEEEEEEEECCCCCEEEEECCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCEECCCC
TGEILWGVPADTDVGRGIAAHIDPRYKGALVWAIDPPGNEGKSYGLYTSKGEKLSDAAPA
CCCEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCEECEEECCCCCCCCCCCC
SANFAIWWDGDLLRELLDHDWKEPAGIPKIDKWDYHSGRLVNLLTADGTLSNNWTKGTPV
CCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCE
LQANLFGDWREDVVFRTVRSDALRIYTTTEPTEHRFYTFMHDPVYRLGVAWQNVAYNQPP
EEEECCCCCHHHHHHHEECCCEEEEEECCCCCCCEEEEEECCCHHHHCEEEHHCCCCCCC
HPGFYVGTGMDKPPRPNIYTVPCKRNEE
CCCEEEECCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]