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The map label for this gene is yomR [H]

Identifier: 52785118

GI number: 52785118

Start: 1342619

End: 1343578

Strand: Direct

Name: yomR [H]

Synonym: BLi01350

Alternate gene names: 52785118

Gene position: 1342619-1343578 (Clockwise)

Preceding gene: 52785117

Following gene: 52785119

Centisome position: 31.8

GC content: 43.54

Gene sequence:

>960_bases
TTGGACATCCAAAAACCGAGATCTTTCAGAACGACGGACAGAGCCCATGCCGATTTGTTTAATCAGGTTATCGACCAGCT
GAATGCAAATGATGAGTCGATTGCACAGTTTGCCGCCGAAGCTGAACAACGTTCAACTGCCTATACAGATGCACACATTT
CGAACAAAGGTAACCCGCATGGTGTAACAAAATCCCAGGTCGGTCTGGGGGAAGTGATCAATAAAAGACAGGCCACAAAA
GATGAGTTTGACTTGCATCATAACGATCAAACACGGCATGTTACTGAAGATGAGAGAAATAAATGGAATGGAAGTCAAAT
TTTTAATATTACCGGGGACAATGGACAAGCAAAGGTATATATAAGCGCCGAAGATGACTTTCAAACGATCCTACCTCAGT
ATACCGGACTGATACATTTTACGGCAGCCTCAGGAGCTATAAACGGACCAGGTGCGGCCGTTCGAGGGATTTGGACTTGC
AACGCTTTAGGTAACTATGGTCAAGCGATCGCGTTTGACAATGCAAATAGAACCTATCGGAAAACAATAGCCGGGGGCAA
CTGGACTGACTGGACAGAATTAATTTCCGCGGAGAGTCTCGAGGCAAAGTTGGCGAACTTAACTTGGCACTTTCCAACGC
TTTTAAACGAATGGGTTAATTATGCGGACAGCACTAAAGTTCGTTATACAAAAGATGCCACAGGTACGGTATTTGTTGAA
GGTGCAATAGCAAAAGGGAAAATTGGTTTTAATATACCTGCATTCGTATTGCCGAAAGGATATCGGCCGTCCCGCGCTTT
TCAGTTTGTAGGTGTAGCATCTCAATTGGGCATGTCCAATACTCCGCAGTATCATAGGCTGCAAGTGAGTGTTGATGGTA
ATGTCGTGATCGAAAACTGCTCAAATACAGTAAATCCAAATGAATATATCAGTTTAGGATTTAGTTTTAAGGCCGCATAA

Upstream 100 bases:

>100_bases
ATACAGTAAATCCAAACGAGTTTATTACTTTCGGGTTTAAGTTTAGAGCTGCATAGCAAAATGAATAGATTACTTTTTCA
CAGAGGAGGGTTAATATAAA

Downstream 100 bases:

>100_bases
AATATGAAAGAGGGAATTAAAATGCCGGAAGCACCAGAACTGGATATATTCCAAAAAGAAGTTCAGGAGATGAAAGCTGA
TCAAAAATCACTCGAACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MDIQKPRSFRTTDRAHADLFNQVIDQLNANDESIAQFAAEAEQRSTAYTDAHISNKGNPHGVTKSQVGLGEVINKRQATK
DEFDLHHNDQTRHVTEDERNKWNGSQIFNITGDNGQAKVYISAEDDFQTILPQYTGLIHFTAASGAINGPGAAVRGIWTC
NALGNYGQAIAFDNANRTYRKTIAGGNWTDWTELISAESLEAKLANLTWHFPTLLNEWVNYADSTKVRYTKDATGTVFVE
GAIAKGKIGFNIPAFVLPKGYRPSRAFQFVGVASQLGMSNTPQYHRLQVSVDGNVVIENCSNTVNPNEYISLGFSFKAA

Sequences:

>Translated_319_residues
MDIQKPRSFRTTDRAHADLFNQVIDQLNANDESIAQFAAEAEQRSTAYTDAHISNKGNPHGVTKSQVGLGEVINKRQATK
DEFDLHHNDQTRHVTEDERNKWNGSQIFNITGDNGQAKVYISAEDDFQTILPQYTGLIHFTAASGAINGPGAAVRGIWTC
NALGNYGQAIAFDNANRTYRKTIAGGNWTDWTELISAESLEAKLANLTWHFPTLLNEWVNYADSTKVRYTKDATGTVFVE
GAIAKGKIGFNIPAFVLPKGYRPSRAFQFVGVASQLGMSNTPQYHRLQVSVDGNVVIENCSNTVNPNEYISLGFSFKAA
>Mature_319_residues
MDIQKPRSFRTTDRAHADLFNQVIDQLNANDESIAQFAAEAEQRSTAYTDAHISNKGNPHGVTKSQVGLGEVINKRQATK
DEFDLHHNDQTRHVTEDERNKWNGSQIFNITGDNGQAKVYISAEDDFQTILPQYTGLIHFTAASGAINGPGAAVRGIWTC
NALGNYGQAIAFDNANRTYRKTIAGGNWTDWTELISAESLEAKLANLTWHFPTLLNEWVNYADSTKVRYTKDATGTVFVE
GAIAKGKIGFNIPAFVLPKGYRPSRAFQFVGVASQLGMSNTPQYHRLQVSVDGNVVIENCSNTVNPNEYISLGFSFKAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35181; Mature: 35181

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQKPRSFRTTDRAHADLFNQVIDQLNANDESIAQFAAEAEQRSTAYTDAHISNKGNPH
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCC
GVTKSQVGLGEVINKRQATKDEFDLHHNDQTRHVTEDERNKWNGSQIFNITGDNGQAKVY
CCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEE
ISAEDDFQTILPQYTGLIHFTAASGAINGPGAAVRGIWTCNALGNYGQAIAFDNANRTYR
EECCCCHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCEEE
KTIAGGNWTDWTELISAESLEAKLANLTWHFPTLLNEWVNYADSTKVRYTKDATGTVFVE
EEECCCCCCHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHCCCCCCEEEEECCCCCEEEEE
GAIAKGKIGFNIPAFVLPKGYRPSRAFQFVGVASQLGMSNTPQYHRLQVSVDGNVVIENC
CEEECCCCCCCCCEEEECCCCCCCHHEEEEEHHHHCCCCCCCCEEEEEEEECCCEEEECC
SNTVNPNEYISLGFSFKAA
CCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MDIQKPRSFRTTDRAHADLFNQVIDQLNANDESIAQFAAEAEQRSTAYTDAHISNKGNPH
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCC
GVTKSQVGLGEVINKRQATKDEFDLHHNDQTRHVTEDERNKWNGSQIFNITGDNGQAKVY
CCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEE
ISAEDDFQTILPQYTGLIHFTAASGAINGPGAAVRGIWTCNALGNYGQAIAFDNANRTYR
EECCCCHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCEEE
KTIAGGNWTDWTELISAESLEAKLANLTWHFPTLLNEWVNYADSTKVRYTKDATGTVFVE
EEECCCCCCHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHCCCCCCEEEEECCCCCEEEEE
GAIAKGKIGFNIPAFVLPKGYRPSRAFQFVGVASQLGMSNTPQYHRLQVSVDGNVVIENC
CEEECCCCCCCCCEEEECCCCCCCHHEEEEEHHHHCCCCCCCCEEEEEEEECCCEEEECC
SNTVNPNEYISLGFSFKAA
CCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]