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The map label for this gene is xkdK [H]

Identifier: 52785105

GI number: 52785105

Start: 1330187

End: 1331533

Strand: Direct

Name: xkdK [H]

Synonym: BLi01337

Alternate gene names: 52785105

Gene position: 1330187-1331533 (Clockwise)

Preceding gene: 52785104

Following gene: 52785106

Centisome position: 31.5

GC content: 48.85

Gene sequence:

>1347_bases
ATGAACGGCGGAACATTTACACCAGGCAAAGAAAAAGATCGTGCCGGCATTTATTTTAATTTTAAAACGACAGCAGAGGA
ACGCGTTTCCATCGGGGATCGCGGTACAGTTGCCCTCCCTGTCGTCATGAGCTGGGGGGAGCCGAAAACATTCGTATCGA
TTTCCAGCATTGAAGACTTAAATAAAAAAGTAGGGTTGAACATCGATGATCCGTCTCTTCTGCTTTTCCGGGAAGCGAAG
AAAAACGCACAGACCGTTTTGCTGTACCGTCTGAACACAGGAGCGCCGGCGAAAGCCCAAATCGGCGAAACGCTGAGCGT
AACGGCAAAATACGGAGGCGAGAAAGGGAACGACATTTCGATCCGCATTTCCGAAAATGTGCTCGATTCTAAAAAGTTTG
ATGTCACCACCTTTGTCGGAACAGATGAAGCTGACCGACAAACCGTCAAAACGGCAGAAGAGCTTACCGCAAATGCGTAC
GTCGCGTTTCAAGGGGAAGGCGCGCTTGAACTGACAGCGGGCACAAAGCTGTCAGGCGGGGAGAACGGAACGGCAAGCGT
TGCCGATTACACCGCATTTTTAGATGCTGCCGAAACGGAATACTTCAATACGATCGCACTCCCGGTCGCAGACAATGAAC
AGCTGAAAGCCACTTTTGCCGCTTTCATCAAACGCCTTCGCGACAAGCAGGGCCAGAAAGTCCAAGGCGTTGTCGCCGAT
TATGCCGGAGACTATGAAGGCATTATTAATGTAACGGGAGGCGTCGTGCTGGAAGACGGCACTGAAATCACTCCTGAAAA
AGCGACGGCATGGGTTGCCGGAGCGAGCGCAGGCGCGACTTTTAACCAGTCGCTGACATTTGTCGAATACGAAGGTGCTG
TTGATGTCCTGAACCGTCTGGATGAAGACCAGGTCATCGAACGTCTGAAAAAAGGCGAGTTTTTATTTACATTTGATGCA
CGCGATCAATCGGTCAGCGTTGAAAAAGACATCAACTCTTTAACGAGTTTCACTGCCGACAAGAACAAAAAATTCTCGAA
AAACAAAATCATCCGCGTTCTCGACGGAGTCAACAATGACCTGACCCGCGAGTTAAAGGCTTTAATCAAAGCACGAAAAG
CAAGCGGCAGCGACATCCCTGCATCAGACGATGGTTTGCAATACGTCAAAACGCTGATCATTCAGTATATGACGGCGCTT
CAGGAAGCCGGCGGCATTACCGGCTTTGATTCTGAAAGCGATATTGCCATTACACTGAATGAAGACCGCGACGGGTTTTT
AATCGATTTAGCCGTTCAGCCGGTTGATGCAGCAGAAAAATTCTACTTTAATGTGGAGGTAAAATAG

Upstream 100 bases:

>100_bases
TTCTCGATGGTGCTCTTTTTCATGTGAAAGAAGAGCAGATTTCAAAACCTGAGGCAAGTCAGCTTATTCAAACATTTTTA
GCCAAGGAGGTCATGAATTA

Downstream 100 bases:

>100_bases
TATGGCATTAAAAGCGCAAAACACGATTTCCGGAAAAGAAGGCCGTCTTTTTCTCGACGGACAAGAGATGGCTCACATCA
AAACATTTGAGGCCAATGTC

Product: XkdK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MNGGTFTPGKEKDRAGIYFNFKTTAEERVSIGDRGTVALPVVMSWGEPKTFVSISSIEDLNKKVGLNIDDPSLLLFREAK
KNAQTVLLYRLNTGAPAKAQIGETLSVTAKYGGEKGNDISIRISENVLDSKKFDVTTFVGTDEADRQTVKTAEELTANAY
VAFQGEGALELTAGTKLSGGENGTASVADYTAFLDAAETEYFNTIALPVADNEQLKATFAAFIKRLRDKQGQKVQGVVAD
YAGDYEGIINVTGGVVLEDGTEITPEKATAWVAGASAGATFNQSLTFVEYEGAVDVLNRLDEDQVIERLKKGEFLFTFDA
RDQSVSVEKDINSLTSFTADKNKKFSKNKIIRVLDGVNNDLTRELKALIKARKASGSDIPASDDGLQYVKTLIIQYMTAL
QEAGGITGFDSESDIAITLNEDRDGFLIDLAVQPVDAAEKFYFNVEVK

Sequences:

>Translated_448_residues
MNGGTFTPGKEKDRAGIYFNFKTTAEERVSIGDRGTVALPVVMSWGEPKTFVSISSIEDLNKKVGLNIDDPSLLLFREAK
KNAQTVLLYRLNTGAPAKAQIGETLSVTAKYGGEKGNDISIRISENVLDSKKFDVTTFVGTDEADRQTVKTAEELTANAY
VAFQGEGALELTAGTKLSGGENGTASVADYTAFLDAAETEYFNTIALPVADNEQLKATFAAFIKRLRDKQGQKVQGVVAD
YAGDYEGIINVTGGVVLEDGTEITPEKATAWVAGASAGATFNQSLTFVEYEGAVDVLNRLDEDQVIERLKKGEFLFTFDA
RDQSVSVEKDINSLTSFTADKNKKFSKNKIIRVLDGVNNDLTRELKALIKARKASGSDIPASDDGLQYVKTLIIQYMTAL
QEAGGITGFDSESDIAITLNEDRDGFLIDLAVQPVDAAEKFYFNVEVK
>Mature_448_residues
MNGGTFTPGKEKDRAGIYFNFKTTAEERVSIGDRGTVALPVVMSWGEPKTFVSISSIEDLNKKVGLNIDDPSLLLFREAK
KNAQTVLLYRLNTGAPAKAQIGETLSVTAKYGGEKGNDISIRISENVLDSKKFDVTTFVGTDEADRQTVKTAEELTANAY
VAFQGEGALELTAGTKLSGGENGTASVADYTAFLDAAETEYFNTIALPVADNEQLKATFAAFIKRLRDKQGQKVQGVVAD
YAGDYEGIINVTGGVVLEDGTEITPEKATAWVAGASAGATFNQSLTFVEYEGAVDVLNRLDEDQVIERLKKGEFLFTFDA
RDQSVSVEKDINSLTSFTADKNKKFSKNKIIRVLDGVNNDLTRELKALIKARKASGSDIPASDDGLQYVKTLIIQYMTAL
QEAGGITGFDSESDIAITLNEDRDGFLIDLAVQPVDAAEKFYFNVEVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqbK and yqbL [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007067 [H]

Pfam domain/function: PF04984 Phage_sheath_1 [H]

EC number: NA

Molecular weight: Translated: 48534; Mature: 48534

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGGTFTPGKEKDRAGIYFNFKTTAEERVSIGDRGTVALPVVMSWGEPKTFVSISSIEDL
CCCCCCCCCCCCCCCEEEEEEECCHHHHHCCCCCCCEEEEEEEECCCCCEEEEEHHHHHH
NKKVGLNIDDPSLLLFREAKKNAQTVLLYRLNTGAPAKAQIGETLSVTAKYGGEKGNDIS
HHHCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCHHHCCCEEEEEEECCCCCCCEEE
IRISENVLDSKKFDVTTFVGTDEADRQTVKTAEELTANAYVAFQGEGALELTAGTKLSGG
EEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCEECCC
ENGTASVADYTAFLDAAETEYFNTIALPVADNEQLKATFAAFIKRLRDKQGQKVQGVVAD
CCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEHHH
YAGDYEGIINVTGGVVLEDGTEITPEKATAWVAGASAGATFNQSLTFVEYEGAVDVLNRL
CCCCCCCEEEECCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHCC
DEDQVIERLKKGEFLFTFDARDQSVSVEKDINSLTSFTADKNKKFSKNKIIRVLDGVNND
CHHHHHHHHHCCCEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHEEEECCCCHH
LTRELKALIKARKASGSDIPASDDGLQYVKTLIIQYMTALQEAGGITGFDSESDIAITLN
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
EDRDGFLIDLAVQPVDAAEKFYFNVEVK
CCCCCEEEEEEECCCCCCCEEEEEEEEC
>Mature Secondary Structure
MNGGTFTPGKEKDRAGIYFNFKTTAEERVSIGDRGTVALPVVMSWGEPKTFVSISSIEDL
CCCCCCCCCCCCCCCEEEEEEECCHHHHHCCCCCCCEEEEEEEECCCCCEEEEEHHHHHH
NKKVGLNIDDPSLLLFREAKKNAQTVLLYRLNTGAPAKAQIGETLSVTAKYGGEKGNDIS
HHHCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCHHHCCCEEEEEEECCCCCCCEEE
IRISENVLDSKKFDVTTFVGTDEADRQTVKTAEELTANAYVAFQGEGALELTAGTKLSGG
EEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCEECCC
ENGTASVADYTAFLDAAETEYFNTIALPVADNEQLKATFAAFIKRLRDKQGQKVQGVVAD
CCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEHHH
YAGDYEGIINVTGGVVLEDGTEITPEKATAWVAGASAGATFNQSLTFVEYEGAVDVLNRL
CCCCCCCEEEECCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHCC
DEDQVIERLKKGEFLFTFDARDQSVSVEKDINSLTSFTADKNKKFSKNKIIRVLDGVNND
CHHHHHHHHHCCCEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHEEEECCCCHH
LTRELKALIKARKASGSDIPASDDGLQYVKTLIIQYMTALQEAGGITGFDSESDIAITLN
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
EDRDGFLIDLAVQPVDAAEKFYFNVEVK
CCCCCEEEEEEECCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]