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The map label for this gene is yjbF [H]

Identifier: 52785017

GI number: 52785017

Start: 1258741

End: 1259889

Strand: Direct

Name: yjbF [H]

Synonym: BLi01246

Alternate gene names: 52785017

Gene position: 1258741-1259889 (Clockwise)

Preceding gene: 52785014

Following gene: 52785018

Centisome position: 29.81

GC content: 49.26

Gene sequence:

>1149_bases
ATGTTCAGTGCAATGATCGATCAAGGCGGGACCATCTGCCTTGCCGACGGATACAAAGCCGAAGATCTCAAGCGATTGAG
AAAAAGACATGCATTTTACTGCCCGGTGTGCCGGTGTGAACTCGACCTGAAAATCGGTTCCGTCAAGCTTCCGCATTTCG
CTCATAAGCCGGATGCAGCATGTCCGGTGCCCCATGAACCGGAGAGCCCCTATCACCTGAAAGGAAAGCGGCTGTTGTAC
GAATGGCTTGGCAGACAAGGACTCCGCCCGGTGCTTGAACCGTATTTGCAAGAGATCAGACAAAGGCCCGATTTGCTGCT
GGAACACGGAACCCGCCAGGTTGCGGTTGAATTTCAATGTGCGAATCTCAATGCCGCAGCGTATCGCAAAAGGACCGAAG
GCTTTCTCAGACTGGGAATCGAGCCCGTATGGATTCTCGGCGGAAACCGGATAAAACGCTTGACGGGGGATTTATTTCAG
CTTTCGCGGTTTCACTGGCAGTTCATTCAGAAAAGCGACAAGCCCCCAAAGCTCCTGTTTTTTTGCCCCGAACAAAAGGC
TTTCATCATCCTCGAACACCTCATTCCCTTTCAAACAAACAAAACATCCGCATCCTTGCGCTTTCTTCCTCTTGCTGAAG
CAAGCTGGCGTAATGTAACAGAACGAGAAAGCCGTTCGCCTCTCCAGCTCAAAGGCTGGAAAAAGAACATCCTCAGCTTT
CGGATGTCGGCCGTGCGTTTTTTATCAAAAGAAACGAAGCAGATTGCCGCCCTCTTTTATGAAAATCATCAGCTTCCGCT
CCCGTTTTTTCCCTCAGAAGCCTTTCTCCCGGTGCCGTCAGGCTATATTTTTGCCCACCCGGTTTATGTATGGCAAGGGT
ACCTTTTTTTATTTATAACGAAGCATGATACATTTCGCCTGCAGTCTGCGCTTCACTATATGGACTGGCTCATCAAGGGC
AAAAGGCTGAAGCTGAGATGGAGCGGGCGGCAAACGGCTGCGGATGCCGTCGGTGAATACATTTGTTTTTTGCATAAAAA
AGGATTTTTGGTGAGGAAAGAGGAATTTTATTATTCCGCGGGTTCTTTTGTTCCGGAGCCGCGGTTAGAGGCGCTGTTAA
AAAGGGATGAACATTATTTTTCCGAATGA

Upstream 100 bases:

>100_bases
TACTACTTTATATAAAATCGGCCTGGATTTGAAGCGTTTTCAAATAAAGGAAAGCTCCCGCCAATGTTGAATACTAGATC
AAACAGGAAGGAGAGATAAT

Downstream 100 bases:

>100_bases
TTATCAAGCCTTTCGTTCAATCTAAAGAAAGGAAGGTGGTGTCCGGACTGTTTCAGATCAAAAGATATGTATTTTATTTT
TTAACGGCGGGATTTTGTGT

Product: YjbF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MFSAMIDQGGTICLADGYKAEDLKRLRKRHAFYCPVCRCELDLKIGSVKLPHFAHKPDAACPVPHEPESPYHLKGKRLLY
EWLGRQGLRPVLEPYLQEIRQRPDLLLEHGTRQVAVEFQCANLNAAAYRKRTEGFLRLGIEPVWILGGNRIKRLTGDLFQ
LSRFHWQFIQKSDKPPKLLFFCPEQKAFIILEHLIPFQTNKTSASLRFLPLAEASWRNVTERESRSPLQLKGWKKNILSF
RMSAVRFLSKETKQIAALFYENHQLPLPFFPSEAFLPVPSGYIFAHPVYVWQGYLFLFITKHDTFRLQSALHYMDWLIKG
KRLKLRWSGRQTAADAVGEYICFLHKKGFLVRKEEFYYSAGSFVPEPRLEALLKRDEHYFSE

Sequences:

>Translated_382_residues
MFSAMIDQGGTICLADGYKAEDLKRLRKRHAFYCPVCRCELDLKIGSVKLPHFAHKPDAACPVPHEPESPYHLKGKRLLY
EWLGRQGLRPVLEPYLQEIRQRPDLLLEHGTRQVAVEFQCANLNAAAYRKRTEGFLRLGIEPVWILGGNRIKRLTGDLFQ
LSRFHWQFIQKSDKPPKLLFFCPEQKAFIILEHLIPFQTNKTSASLRFLPLAEASWRNVTERESRSPLQLKGWKKNILSF
RMSAVRFLSKETKQIAALFYENHQLPLPFFPSEAFLPVPSGYIFAHPVYVWQGYLFLFITKHDTFRLQSALHYMDWLIKG
KRLKLRWSGRQTAADAVGEYICFLHKKGFLVRKEEFYYSAGSFVPEPRLEALLKRDEHYFSE
>Mature_382_residues
MFSAMIDQGGTICLADGYKAEDLKRLRKRHAFYCPVCRCELDLKIGSVKLPHFAHKPDAACPVPHEPESPYHLKGKRLLY
EWLGRQGLRPVLEPYLQEIRQRPDLLLEHGTRQVAVEFQCANLNAAAYRKRTEGFLRLGIEPVWILGGNRIKRLTGDLFQ
LSRFHWQFIQKSDKPPKLLFFCPEQKAFIILEHLIPFQTNKTSASLRFLPLAEASWRNVTERESRSPLQLKGWKKNILSF
RMSAVRFLSKETKQIAALFYENHQLPLPFFPSEAFLPVPSGYIFAHPVYVWQGYLFLFITKHDTFRLQSALHYMDWLIKG
KRLKLRWSGRQTAADAVGEYICFLHKKGFLVRKEEFYYSAGSFVPEPRLEALLKRDEHYFSE

Specific function: Required for optimal transformation [H]

COG id: COG4469

COG function: function code R; Competence protein

Gene ontology:

Cell location: Cytoplasm (Probable). Note=Localizes at the cell poles of most competence-expressing cells [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010330
- InterPro:   IPR021176 [H]

Pfam domain/function: PF06054 CoiA [H]

EC number: NA

Molecular weight: Translated: 44647; Mature: 44647

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSAMIDQGGTICLADGYKAEDLKRLRKRHAFYCPVCRCELDLKIGSVKLPHFAHKPDAA
CCCCEECCCCEEEEECCCCHHHHHHHHHCCCEECCEEEEEEEEEECCEECCCCCCCCCCC
CPVPHEPESPYHLKGKRLLYEWLGRQGLRPVLEPYLQEIRQRPDLLLEHGTRQVAVEFQC
CCCCCCCCCCCEECHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCCEEEEEEEEE
ANLNAAAYRKRTEGFLRLGIEPVWILGGNRIKRLTGDLFQLSRFHWQFIQKSDKPPKLLF
CCCCHHHHHHHHCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
FCPEQKAFIILEHLIPFQTNKTSASLRFLPLAEASWRNVTERESRSPLQLKGWKKNILSF
ECCCCCCEEEEEHHCCCCCCCCCCEEEEEECCCCHHCCCHHHHCCCCCEECCHHHHHHHH
RMSAVRFLSKETKQIAALFYENHQLPLPFFPSEAFLPVPSGYIFAHPVYVWQGYLFLFIT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHCCEEEEEEE
KHDTFRLQSALHYMDWLIKGKRLKLRWSGRQTAADAVGEYICFLHKKGFLVRKEEFYYSA
CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEHHHEEEC
GSFVPEPRLEALLKRDEHYFSE
CCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSAMIDQGGTICLADGYKAEDLKRLRKRHAFYCPVCRCELDLKIGSVKLPHFAHKPDAA
CCCCEECCCCEEEEECCCCHHHHHHHHHCCCEECCEEEEEEEEEECCEECCCCCCCCCCC
CPVPHEPESPYHLKGKRLLYEWLGRQGLRPVLEPYLQEIRQRPDLLLEHGTRQVAVEFQC
CCCCCCCCCCCEECHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCCEEEEEEEEE
ANLNAAAYRKRTEGFLRLGIEPVWILGGNRIKRLTGDLFQLSRFHWQFIQKSDKPPKLLF
CCCCHHHHHHHHCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
FCPEQKAFIILEHLIPFQTNKTSASLRFLPLAEASWRNVTERESRSPLQLKGWKKNILSF
ECCCCCCEEEEEHHCCCCCCCCCCEEEEEECCCCHHCCCHHHHCCCCCEECCHHHHHHHH
RMSAVRFLSKETKQIAALFYENHQLPLPFFPSEAFLPVPSGYIFAHPVYVWQGYLFLFIT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHCCEEEEEEE
KHDTFRLQSALHYMDWLIKGKRLKLRWSGRQTAADAVGEYICFLHKKGFLVRKEEFYYSA
CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEHHHEEEC
GSFVPEPRLEALLKRDEHYFSE
CCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]