Click here to switch to the map view.

The map label for this gene is yjaU [H]

Identifier: 52784988

GI number: 52784988

Start: 1227654

End: 1228388

Strand: Direct

Name: yjaU [H]

Synonym: BLi01216

Alternate gene names: 52784988

Gene position: 1227654-1228388 (Clockwise)

Preceding gene: 52784986

Following gene: 52784989

Centisome position: 29.07

GC content: 45.17

Gene sequence:

>735_bases
ATGAAAATAACCGAACGTTTTTTTCAAATGGATTCAGAATGGAACGTGGTTCATCTTCCGTACAAGCCGAACGGTTTTCT
GGTGTTCATTTTCGGCGACCGGAACCATTTTGTCGGGGAAGATTCGAGCTTCTGGCTTCAGCATTACGGACGAAATCAGC
TTCTAACGAGCCTGAGAAACAAAGGCTATACCCTGGTAAACAGCAATTTATTCGGCAGGCACTGGGGCTCCGAAAAAGCG
GTTGCATACGCGAAACAGCTGATTCATTACGTGTTCAAACAAGAGATATTAAATGAAAAAATTCATCTATTGGCGGAAGG
CACAGGGGCCCTCATTGCAGATGAGCTCCTTCGCTCAATCCCGAACCAAATACGTTCTACAGCGATGGTTAATCCTTGCC
TCGATCTTCAGGCTCATCATAAACGAGAAAAAGAAAACAAGTTTTTCTACAAACAGTTTATTAAAGAAATTGCCGAAAGC
TACGGAATTACGGAGCGGGAGGCAGCCGATTATCCGTTCAAAAGCATATCCCCTTATCACAATCTCGTACCCGTTCATAT
TTGGCAAAGACTGAACGGGTCACCGTATCCGTATATGATCCATGCCAAAACGTTTGAGGAGCGCCAGCTTAAAGGCCGTC
ACAGCGTGGGGCTTACCCTGCACCTGTCCGAACATCCTCAGCGCATTCATTCAGCAATCGCGAACTTTTTCAAAACGCAT
GAAAAAGTCTTATAG

Upstream 100 bases:

>100_bases
TTACTTTTCATCATGAAGACTGGGACTTTTCCTTATTCGTTTGCTGCACGTACGACATAAAATAATGAGCAGATTACGGC
AGGAAGGAGGCGGGCAAGTG

Downstream 100 bases:

>100_bases
AGAATAGAATAATAGCAGCCCGAAAATGATGAAAAGGGCTGTTTTTTGCTTGGTTAAAAAAGCTGAAACGAAAGGTGGTC
CATCGAATGAAGCCGGCACT

Product: YjaU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MKITERFFQMDSEWNVVHLPYKPNGFLVFIFGDRNHFVGEDSSFWLQHYGRNQLLTSLRNKGYTLVNSNLFGRHWGSEKA
VAYAKQLIHYVFKQEILNEKIHLLAEGTGALIADELLRSIPNQIRSTAMVNPCLDLQAHHKREKENKFFYKQFIKEIAES
YGITEREAADYPFKSISPYHNLVPVHIWQRLNGSPYPYMIHAKTFEERQLKGRHSVGLTLHLSEHPQRIHSAIANFFKTH
EKVL

Sequences:

>Translated_244_residues
MKITERFFQMDSEWNVVHLPYKPNGFLVFIFGDRNHFVGEDSSFWLQHYGRNQLLTSLRNKGYTLVNSNLFGRHWGSEKA
VAYAKQLIHYVFKQEILNEKIHLLAEGTGALIADELLRSIPNQIRSTAMVNPCLDLQAHHKREKENKFFYKQFIKEIAES
YGITEREAADYPFKSISPYHNLVPVHIWQRLNGSPYPYMIHAKTFEERQLKGRHSVGLTLHLSEHPQRIHSAIANFFKTH
EKVL
>Mature_244_residues
MKITERFFQMDSEWNVVHLPYKPNGFLVFIFGDRNHFVGEDSSFWLQHYGRNQLLTSLRNKGYTLVNSNLFGRHWGSEKA
VAYAKQLIHYVFKQEILNEKIHLLAEGTGALIADELLRSIPNQIRSTAMVNPCLDLQAHHKREKENKFFYKQFIKEIAES
YGITEREAADYPFKSISPYHNLVPVHIWQRLNGSPYPYMIHAKTFEERQLKGRHSVGLTLHLSEHPQRIHSAIANFFKTH
EKVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28606; Mature: 28606

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITERFFQMDSEWNVVHLPYKPNGFLVFIFGDRNHFVGEDSSFWLQHYGRNQLLTSLRN
CCHHHHHHHCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHH
KGYTLVNSNLFGRHWGSEKAVAYAKQLIHYVFKQEILNEKIHLLAEGTGALIADELLRSI
CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
PNQIRSTAMVNPCLDLQAHHKREKENKFFYKQFIKEIAESYGITEREAADYPFKSISPYH
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
NLVPVHIWQRLNGSPYPYMIHAKTFEERQLKGRHSVGLTLHLSEHPQRIHSAIANFFKTH
CCHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
EKVL
HHCC
>Mature Secondary Structure
MKITERFFQMDSEWNVVHLPYKPNGFLVFIFGDRNHFVGEDSSFWLQHYGRNQLLTSLRN
CCHHHHHHHCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHH
KGYTLVNSNLFGRHWGSEKAVAYAKQLIHYVFKQEILNEKIHLLAEGTGALIADELLRSI
CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
PNQIRSTAMVNPCLDLQAHHKREKENKFFYKQFIKEIAESYGITEREAADYPFKSISPYH
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
NLVPVHIWQRLNGSPYPYMIHAKTFEERQLKGRHSVGLTLHLSEHPQRIHSAIANFFKTH
CCHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
EKVL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]