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The map label for this gene is yobV [H]

Identifier: 52784963

GI number: 52784963

Start: 1201266

End: 1202228

Strand: Direct

Name: yobV [H]

Synonym: BLi01191

Alternate gene names: 52784963

Gene position: 1201266-1202228 (Clockwise)

Preceding gene: 52784960

Following gene: 52784967

Centisome position: 28.45

GC content: 45.9

Gene sequence:

>963_bases
ATGAGAGGGGATCGACTGATATCTATTCTTTTAATGCTTCAGGCACAAGGGCAAATGACGGCGAAAGAATTAGCGGAAAG
GCTGGAAGTCTCCGAGCGCACGATTTACAGGGATATGGAAGCTTTAAGCGGAGCGGGGATTCCCGTTGTGGCCGAACGCG
GCATAAACGGAGGCTGGTCATTGCTTGATGATTACCAAACCACTCTAACCGGCTTAAAAGAATCTGAAATACGCGCACTA
TTTGTTCCGCTTTCTGAACAATTGCTTGACGATCTCGGATTAACCCGCATATCCGAAGAAGCCCGAAATAAACTGATTGC
CTCGCTGCCTTCGGAATATCGCCAAAACGCAAAGGATGTATGGAACCGCATATATATTGATACCTGTTCATGGCGCCATA
AGAAAGAAAAAGCAGAATCCTTTGAAGTGCTGAAAGATGCCATATGGAAAGATCAAAAATTAAAAATTGTCTATCAGCGG
GCAGATGGACAAACGGCTGATCGTGTTGTTGCACCGCTTGGGCTGGTGGCTAAAGGGGCGAACTGGTATCTGATTGCATC
TAAAGAAAATGGGGAGATTCGGAATTACAGGGCTTCACGGATTAAATCTGCCGTTTTTGTCCGCGAAACGTTTGATAGGC
CCGAAAATTTTGATATTGCTCACGTGTGGCGGTCTTCAACAAAGGAATTTATTGAAAGGCTGCCGACGTATGAAGTGCGG
GTGAAGGCGGCGCAGGCCATCTTGCCGAGGCTGTCGTTTACCAATCATTTTGTGCGGATCATCGAAACAAATGAGATCGA
TCAGGAGGGCTGGATCCCCGTTACGCTATCCTTTGATACGGAAGAAGAAGCAAAAAGGTATATACTCGGATTCGCAGAGC
ACATGAGGATCATTGAACCTAAAGAACTGCACGGAAAGATACTTAAAATGGCTGAATCCATAGTTGCGCATTATAAAACC
TGA

Upstream 100 bases:

>100_bases
CTTTCATTTAAAAAGATATGTTCATTATAAAAGCTCAATCTTGACAACCATTGTCATATTTTATTAAATAAGTTCATTCA
TTGATAAGAAAGGTGGTCAT

Downstream 100 bases:

>100_bases
AAGCGGCAATGACTTTATGTTAAAGACATACATGATAAACCCTGCCGGCCGCAAACGGCAGGCAGGGTCTTCGTTTAATG
AACATTGAAATATCTGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MRGDRLISILLMLQAQGQMTAKELAERLEVSERTIYRDMEALSGAGIPVVAERGINGGWSLLDDYQTTLTGLKESEIRAL
FVPLSEQLLDDLGLTRISEEARNKLIASLPSEYRQNAKDVWNRIYIDTCSWRHKKEKAESFEVLKDAIWKDQKLKIVYQR
ADGQTADRVVAPLGLVAKGANWYLIASKENGEIRNYRASRIKSAVFVRETFDRPENFDIAHVWRSSTKEFIERLPTYEVR
VKAAQAILPRLSFTNHFVRIIETNEIDQEGWIPVTLSFDTEEEAKRYILGFAEHMRIIEPKELHGKILKMAESIVAHYKT

Sequences:

>Translated_320_residues
MRGDRLISILLMLQAQGQMTAKELAERLEVSERTIYRDMEALSGAGIPVVAERGINGGWSLLDDYQTTLTGLKESEIRAL
FVPLSEQLLDDLGLTRISEEARNKLIASLPSEYRQNAKDVWNRIYIDTCSWRHKKEKAESFEVLKDAIWKDQKLKIVYQR
ADGQTADRVVAPLGLVAKGANWYLIASKENGEIRNYRASRIKSAVFVRETFDRPENFDIAHVWRSSTKEFIERLPTYEVR
VKAAQAILPRLSFTNHFVRIIETNEIDQEGWIPVTLSFDTEEEAKRYILGFAEHMRIIEPKELHGKILKMAESIVAHYKT
>Mature_320_residues
MRGDRLISILLMLQAQGQMTAKELAERLEVSERTIYRDMEALSGAGIPVVAERGINGGWSLLDDYQTTLTGLKESEIRAL
FVPLSEQLLDDLGLTRISEEARNKLIASLPSEYRQNAKDVWNRIYIDTCSWRHKKEKAESFEVLKDAIWKDQKLKIVYQR
ADGQTADRVVAPLGLVAKGANWYLIASKENGEIRNYRASRIKSAVFVRETFDRPENFDIAHVWRSSTKEFIERLPTYEVR
VKAAQAILPRLSFTNHFVRIIETNEIDQEGWIPVTLSFDTEEEAKRYILGFAEHMRIIEPKELHGKILKMAESIVAHYKT

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 36812; Mature: 36812

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGDRLISILLMLQAQGQMTAKELAERLEVSERTIYRDMEALSGAGIPVVAERGINGGWS
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHH
LLDDYQTTLTGLKESEIRALFVPLSEQLLDDLGLTRISEEARNKLIASLPSEYRQNAKDV
HHHHHHHHHHCCCCCCHHEEEECHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHH
WNRIYIDTCSWRHKKEKAESFEVLKDAIWKDQKLKIVYQRADGQTADRVVAPLGLVAKGA
HHEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCC
NWYLIASKENGEIRNYRASRIKSAVFVRETFDRPENFDIAHVWRSSTKEFIERLPTYEVR
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEH
VKAAQAILPRLSFTNHFVRIIETNEIDQEGWIPVTLSFDTEEEAKRYILGFAEHMRIIEP
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCC
KELHGKILKMAESIVAHYKT
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRGDRLISILLMLQAQGQMTAKELAERLEVSERTIYRDMEALSGAGIPVVAERGINGGWS
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHH
LLDDYQTTLTGLKESEIRALFVPLSEQLLDDLGLTRISEEARNKLIASLPSEYRQNAKDV
HHHHHHHHHHCCCCCCHHEEEECHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHH
WNRIYIDTCSWRHKKEKAESFEVLKDAIWKDQKLKIVYQRADGQTADRVVAPLGLVAKGA
HHEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCC
NWYLIASKENGEIRNYRASRIKSAVFVRETFDRPENFDIAHVWRSSTKEFIERLPTYEVR
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEH
VKAAQAILPRLSFTNHFVRIIETNEIDQEGWIPVTLSFDTEEEAKRYILGFAEHMRIIEP
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCC
KELHGKILKMAESIVAHYKT
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]