Click here to switch to the map view.

The map label for this gene is ylbE [H]

Identifier: 52784904

GI number: 52784904

Start: 1136220

End: 1137485

Strand: Direct

Name: ylbE [H]

Synonym: BLi01132

Alternate gene names: 52784904

Gene position: 1136220-1137485 (Clockwise)

Preceding gene: 52784903

Following gene: 52784905

Centisome position: 26.91

GC content: 41.86

Gene sequence:

>1266_bases
ATGGGGTACAAAACAATAAATGAAGCGAACGAAGCTGTTATCCGGAAGATCATAGCAGCTGAACCATTCTTGACCGATGT
TGTACCTGCCAAGTCTGTGATTCCTGAATTAGAAGATTATGTGTTATTACATGCTGGGCCTCCAATTAAATATGAAAATA
TGACAGATCCTATGCAAGGCTCTTGTGTTGGAGCGATTCTTTTTGAAGGATGGGCAGAAGATGAAGAGGGAGCGCGTGGT
CTGCTTGAAAACAATAAGATTACATTTATTCCATGTCATCATGTGAATGCAGTTGGACCAATGGGAGGCATTACATCACC
TAATATGCCGGTTCTTGTTGTTATGAACAAAGAGAGTGGCAATGAGGCGTACTGTCAAATGAACGAAGGCATCGGTGCAG
TATTACGCTTCGGTGCTTATCATGAGCAGGTAATCAATCGCCTGCACTGGATGAAAGATGTGTTGGGTCCAGTGTTAAGT
AAGGCCTTAAGAAAAATTGATGGAGGCATAAACGTTAATGTTTTGATGGCTAAAGCTATTGCAATGGGGGATGAATTTCA
CCAGCGCAATATTGCAGCATCATTGGTGTTTTTAAAAGAAGTTGCTCCAGTAATTGTGGCATTAGATGATGTTGAAAACG
AACAAAGTGCAGAAGTTATCCAATTTTTAGCTGATACAGACCAATTTTTCTTAAACATTGCCATGGCGACTGGAAAAGCA
ATAATGGATGCAGCGCGTACAATCAAACATGGTACAGTCGTTACTGCAATGTGCCGAAACGGTGAAAACTTTGGCATTCG
TATTGCTGGTATGGGAGATGAGTGGTTTACAGCACCTGTTAATACACCACAAGGGTTATATTTTACCGGCTACTCAGCGG
AAGATGCAAACACAGATATCGGTGATTCAGCGATTACAGAAACAATCGGTGTTGGCGGCGTAGCAATGATTGCTGCCCCT
GCAGTAACGCGTTTTGTTGGAACAGGCGGATTTAATGATGCGCTTGAAACAAGCAATCAAATGGCTGAAATCTGTGTTGG
AGAAAATCCGAACTTTGTTATTCCGACGTGGGACTTCAAAGGTGCGTGTTTAGGTATTGATGCACGTAAAGTTGTTGAAA
CAGGCATAACACCGGTAATCAACACAGGTATTGCACATAAAATTGCTGGATATGGGCAAATTGGTGCTGGTACAGTTCAT
CCTCCAATCGAATGTTTTGAGAAAGCAATCACAGCATATGCTGAAAAACTAGGTTTTCAAGGATGA

Upstream 100 bases:

>100_bases
CAGAGTGTGTTCAATTTAACTGGCGGCCAATTGCTGGCGGTGATGAAAAGCTAATGAAAGTGCTTCAATATCTAAACTAC
TATGAAGGAGAGACAATCTA

Downstream 100 bases:

>100_bases
TTTTACAGGCAAGTGCGGTTGGTTCAATCGCACTTCAGCTATTAATTGAGGGAAAAACGTTTACTGTACACAGCATTTTT
GAAAAAGGTTTAAATATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MGYKTINEANEAVIRKIIAAEPFLTDVVPAKSVIPELEDYVLLHAGPPIKYENMTDPMQGSCVGAILFEGWAEDEEGARG
LLENNKITFIPCHHVNAVGPMGGITSPNMPVLVVMNKESGNEAYCQMNEGIGAVLRFGAYHEQVINRLHWMKDVLGPVLS
KALRKIDGGINVNVLMAKAIAMGDEFHQRNIAASLVFLKEVAPVIVALDDVENEQSAEVIQFLADTDQFFLNIAMATGKA
IMDAARTIKHGTVVTAMCRNGENFGIRIAGMGDEWFTAPVNTPQGLYFTGYSAEDANTDIGDSAITETIGVGGVAMIAAP
AVTRFVGTGGFNDALETSNQMAEICVGENPNFVIPTWDFKGACLGIDARKVVETGITPVINTGIAHKIAGYGQIGAGTVH
PPIECFEKAITAYAEKLGFQG

Sequences:

>Translated_421_residues
MGYKTINEANEAVIRKIIAAEPFLTDVVPAKSVIPELEDYVLLHAGPPIKYENMTDPMQGSCVGAILFEGWAEDEEGARG
LLENNKITFIPCHHVNAVGPMGGITSPNMPVLVVMNKESGNEAYCQMNEGIGAVLRFGAYHEQVINRLHWMKDVLGPVLS
KALRKIDGGINVNVLMAKAIAMGDEFHQRNIAASLVFLKEVAPVIVALDDVENEQSAEVIQFLADTDQFFLNIAMATGKA
IMDAARTIKHGTVVTAMCRNGENFGIRIAGMGDEWFTAPVNTPQGLYFTGYSAEDANTDIGDSAITETIGVGGVAMIAAP
AVTRFVGTGGFNDALETSNQMAEICVGENPNFVIPTWDFKGACLGIDARKVVETGITPVINTGIAHKIAGYGQIGAGTVH
PPIECFEKAITAYAEKLGFQG
>Mature_420_residues
GYKTINEANEAVIRKIIAAEPFLTDVVPAKSVIPELEDYVLLHAGPPIKYENMTDPMQGSCVGAILFEGWAEDEEGARGL
LENNKITFIPCHHVNAVGPMGGITSPNMPVLVVMNKESGNEAYCQMNEGIGAVLRFGAYHEQVINRLHWMKDVLGPVLSK
ALRKIDGGINVNVLMAKAIAMGDEFHQRNIAASLVFLKEVAPVIVALDDVENEQSAEVIQFLADTDQFFLNIAMATGKAI
MDAARTIKHGTVVTAMCRNGENFGIRIAGMGDEWFTAPVNTPQGLYFTGYSAEDANTDIGDSAITETIGVGGVAMIAAPA
VTRFVGTGGFNDALETSNQMAEICVGENPNFVIPTWDFKGACLGIDARKVVETGITPVINTGIAHKIAGYGQIGAGTVHP
PIECFEKAITAYAEKLGFQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yahG [H]

Homologues:

Organism=Escherichia coli, GI1786514, Length=413, Percent_Identity=46.4891041162228, Blast_Score=361, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009499 [H]

Pfam domain/function: PF06545 DUF1116 [H]

EC number: NA

Molecular weight: Translated: 45034; Mature: 44903

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYKTINEANEAVIRKIIAAEPFLTDVVPAKSVIPELEDYVLLHAGPPIKYENMTDPMQG
CCCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
SCVGAILFEGWAEDEEGARGLLENNKITFIPCHHVNAVGPMGGITSPNMPVLVVMNKESG
CEEEEHEECCCCCCCCCCCCHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCC
NEAYCQMNEGIGAVLRFGAYHEQVINRLHWMKDVLGPVLSKALRKIDGGINVNVLMAKAI
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHH
AMGDEFHQRNIAASLVFLKEVAPVIVALDDVENEQSAEVIQFLADTDQFFLNIAMATGKA
HHCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCCHHHEEEHHHHHHH
IMDAARTIKHGTVVTAMCRNGENFGIRIAGMGDEWFTAPVNTPQGLYFTGYSAEDANTDI
HHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCEEECCCCCCCCEEEECCCCCCCCCCC
GDSAITETIGVGGVAMIAAPAVTRFVGTGGFNDALETSNQMAEICVGENPNFVIPTWDFK
CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHEECCCCCEEEECCCCC
GACLGIDARKVVETGITPVINTGIAHKIAGYGQIGAGTVHPPIECFEKAITAYAEKLGFQ
CEEECCCHHHHHHHCCCHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
G
C
>Mature Secondary Structure 
GYKTINEANEAVIRKIIAAEPFLTDVVPAKSVIPELEDYVLLHAGPPIKYENMTDPMQG
CCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
SCVGAILFEGWAEDEEGARGLLENNKITFIPCHHVNAVGPMGGITSPNMPVLVVMNKESG
CEEEEHEECCCCCCCCCCCCHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCC
NEAYCQMNEGIGAVLRFGAYHEQVINRLHWMKDVLGPVLSKALRKIDGGINVNVLMAKAI
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHH
AMGDEFHQRNIAASLVFLKEVAPVIVALDDVENEQSAEVIQFLADTDQFFLNIAMATGKA
HHCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCCHHHEEEHHHHHHH
IMDAARTIKHGTVVTAMCRNGENFGIRIAGMGDEWFTAPVNTPQGLYFTGYSAEDANTDI
HHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCEEECCCCCCCCEEEECCCCCCCCCCC
GDSAITETIGVGGVAMIAAPAVTRFVGTGGFNDALETSNQMAEICVGENPNFVIPTWDFK
CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHEECCCCCEEEECCCCC
GACLGIDARKVVETGITPVINTGIAHKIAGYGQIGAGTVHPPIECFEKAITAYAEKLGFQ
CEEECCCHHHHHHHCCCHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 7500942 [H]