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The map label for this gene is hemAT [H]

Identifier: 52784887

GI number: 52784887

Start: 1115479

End: 1116771

Strand: Reverse

Name: hemAT [H]

Synonym: BLi01115

Alternate gene names: 52784887

Gene position: 1116771-1115479 (Counterclockwise)

Preceding gene: 52784888

Following gene: 52784886

Centisome position: 26.45

GC content: 46.33

Gene sequence:

>1293_bases
GTGTTATTCAAAAAGGATAGAAAGACAGAACGATCATTTTTTGCTGGGGAAAGCCCTGACCAAACAAAAAGAATCAGGCT
CAATCAGCACGCAGAATTTAAAAAACAGCTGGCAATGGTCGATTTGACGGATGAGGATCTTTGGGTGCTGAGCAGGCTGA
AGCCCTTAGTCACTGAACATATTGAAACCATCGTCACCCGATTTTATCAAAATCTTGAGCATGAAAGCTCTCTCATGGAG
ATCATCCATGACAACAGCTCGGTCGACCGTCTCAAAAAGACATTGACGATCCACATCCAGGAAATGTTTTCAGGCGTCAT
CGACGAAGCCTTTTTAGAAAAAAGAATCCGGATCGCCCACGTTCATCTTCGCATCGGACTGTTGCCAAAGTGGTATCTGG
GGGCATTTCAAGATCTCCTTCTTTCAATGCTGAAGATCTTTGAAAACGCCTTATCCGATGAGGAATACAGGCGGTCTGTC
AAAGCCGTCACCAAAATTCTCAACATCGAACAGCAGATCGTCCTGGAGGCCTTTGAAGACGAACACGCGAGACTCCGCAG
ACTTGATGAAGAAAGCAAAAATGAACTTCACAGGCAAATTAAAGATACTTCCGGTTCTTTGGCCGCTATATTTGCCGAAA
CGACGGGCGCCGTACAGGAATTGGTCGACAAATCTTCCGAGATCGCCGAAACGTCAAGAGCCGGAACGAAGACAGCCGTT
TCTGTCGAACAAAAATCGATCGGCGGAAAAAAGGAGCTTGAGGAACAGGAACAGCAGCTGAATCAAATGGGAAGCAGCAT
GACGCAAATCGAGCAGGAAATTAAAAAGCTGGAAGAAATCGCGCTGCAGATCGAAAAGATATTCGGCATCGTAACAGGCA
TTGCCGAACAGACGAATTTGCTTTCGCTCAACGCCTCGATCGAATCGGCAAGGGCAGGAGAGCACGGCAAAGGTTTCGCA
GTTGTCGCAAACGAAGTCAGAAAGCTGTCCGATGATACGAAAAAAACCGTCTCCACCGTATCAGAGCTCGTCAATAACAC
AAACGCTCAAATCTCGATCGTCACGAAGCATATTACAGATGTAAATCAGCTTGTGAACGAAAGCAAAGACAAGATGTCGG
AGATCAATCGCCTATTCGATGATATCGTCTCCAATATGAAAACGAGCAAAGAGCAAAGCGGCCGAATCGAAGGCGACCTG
CAGTCGTTTTTAAGCGGCCTTCAAGATGTCAATGCCGCCGTATCACAAGTCGCAGTTTCAGTCGATTCTCTCGTAGAGCT
GACAAAAAAATGA

Upstream 100 bases:

>100_bases
CAAGTTAAAAAGTAATGAAAAATTGCCGATAAAAAGATAAATGCTGGAAATTTCAAAAAAACGGCAGTTTTATCATTAAT
GATTACAGGGGGATACGATC

Downstream 100 bases:

>100_bases
GGCGTTACCGTACACAGGTCAATCATGACCTGTGTATTTTTTCACATCCATACTTTGAGAAGTCTGCCGTGCAAGCAAAG
ATATATATTCACAGCCATCA

Product: HemAT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MLFKKDRKTERSFFAGESPDQTKRIRLNQHAEFKKQLAMVDLTDEDLWVLSRLKPLVTEHIETIVTRFYQNLEHESSLME
IIHDNSSVDRLKKTLTIHIQEMFSGVIDEAFLEKRIRIAHVHLRIGLLPKWYLGAFQDLLLSMLKIFENALSDEEYRRSV
KAVTKILNIEQQIVLEAFEDEHARLRRLDEESKNELHRQIKDTSGSLAAIFAETTGAVQELVDKSSEIAETSRAGTKTAV
SVEQKSIGGKKELEEQEQQLNQMGSSMTQIEQEIKKLEEIALQIEKIFGIVTGIAEQTNLLSLNASIESARAGEHGKGFA
VVANEVRKLSDDTKKTVSTVSELVNNTNAQISIVTKHITDVNQLVNESKDKMSEINRLFDDIVSNMKTSKEQSGRIEGDL
QSFLSGLQDVNAAVSQVAVSVDSLVELTKK

Sequences:

>Translated_430_residues
MLFKKDRKTERSFFAGESPDQTKRIRLNQHAEFKKQLAMVDLTDEDLWVLSRLKPLVTEHIETIVTRFYQNLEHESSLME
IIHDNSSVDRLKKTLTIHIQEMFSGVIDEAFLEKRIRIAHVHLRIGLLPKWYLGAFQDLLLSMLKIFENALSDEEYRRSV
KAVTKILNIEQQIVLEAFEDEHARLRRLDEESKNELHRQIKDTSGSLAAIFAETTGAVQELVDKSSEIAETSRAGTKTAV
SVEQKSIGGKKELEEQEQQLNQMGSSMTQIEQEIKKLEEIALQIEKIFGIVTGIAEQTNLLSLNASIESARAGEHGKGFA
VVANEVRKLSDDTKKTVSTVSELVNNTNAQISIVTKHITDVNQLVNESKDKMSEINRLFDDIVSNMKTSKEQSGRIEGDL
QSFLSGLQDVNAAVSQVAVSVDSLVELTKK
>Mature_430_residues
MLFKKDRKTERSFFAGESPDQTKRIRLNQHAEFKKQLAMVDLTDEDLWVLSRLKPLVTEHIETIVTRFYQNLEHESSLME
IIHDNSSVDRLKKTLTIHIQEMFSGVIDEAFLEKRIRIAHVHLRIGLLPKWYLGAFQDLLLSMLKIFENALSDEEYRRSV
KAVTKILNIEQQIVLEAFEDEHARLRRLDEESKNELHRQIKDTSGSLAAIFAETTGAVQELVDKSSEIAETSRAGTKTAV
SVEQKSIGGKKELEEQEQQLNQMGSSMTQIEQEIKKLEEIALQIEKIFGIVTGIAEQTNLLSLNASIESARAGEHGKGFA
VVANEVRKLSDDTKKTVSTVSELVNNTNAQISIVTKHITDVNQLVNESKDKMSEINRLFDDIVSNMKTSKEQSGRIEGDL
QSFLSGLQDVNAAVSQVAVSVDSLVELTKK

Specific function: Heme-containing signal transducer responsible for aerotaxis, the migratory response toward or away from oxygen [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=222, Percent_Identity=30.6306306306306, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1788194, Length=206, Percent_Identity=29.126213592233, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI2367378, Length=215, Percent_Identity=26.5116279069767, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1789453, Length=226, Percent_Identity=28.7610619469027, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1787690, Length=182, Percent_Identity=27.4725274725275, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR012292
- InterPro:   IPR009050 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 48533; Mature: 48533

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFKKDRKTERSFFAGESPDQTKRIRLNQHAEFKKQLAMVDLTDEDLWVLSRLKPLVTEH
CCCCCCCCHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IETIVTRFYQNLEHESSLMEIIHDNSSVDRLKKTLTIHIQEMFSGVIDEAFLEKRIRIAH
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHLRIGLLPKWYLGAFQDLLLSMLKIFENALSDEEYRRSVKAVTKILNIEQQIVLEAFED
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHARLRRLDEESKNELHRQIKDTSGSLAAIFAETTGAVQELVDKSSEIAETSRAGTKTAV
HHHHHHHHCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHH
SVEQKSIGGKKELEEQEQQLNQMGSSMTQIEQEIKKLEEIALQIEKIFGIVTGIAEQTNL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
LSLNASIESARAGEHGKGFAVVANEVRKLSDDTKKTVSTVSELVNNTNAQISIVTKHITD
EEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHH
VNQLVNESKDKMSEINRLFDDIVSNMKTSKEQSGRIEGDLQSFLSGLQDVNAAVSQVAVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VDSLVELTKK
HHHHHHHHCC
>Mature Secondary Structure
MLFKKDRKTERSFFAGESPDQTKRIRLNQHAEFKKQLAMVDLTDEDLWVLSRLKPLVTEH
CCCCCCCCHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IETIVTRFYQNLEHESSLMEIIHDNSSVDRLKKTLTIHIQEMFSGVIDEAFLEKRIRIAH
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHLRIGLLPKWYLGAFQDLLLSMLKIFENALSDEEYRRSVKAVTKILNIEQQIVLEAFED
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHARLRRLDEESKNELHRQIKDTSGSLAAIFAETTGAVQELVDKSSEIAETSRAGTKTAV
HHHHHHHHCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHH
SVEQKSIGGKKELEEQEQQLNQMGSSMTQIEQEIKKLEEIALQIEKIFGIVTGIAEQTNL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
LSLNASIESARAGEHGKGFAVVANEVRKLSDDTKKTVSTVSELVNNTNAQISIVTKHITD
EEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHH
VNQLVNESKDKMSEINRLFDDIVSNMKTSKEQSGRIEGDLQSFLSGLQDVNAAVSQVAVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VDSLVELTKK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 10676961; 11821422 [H]