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The map label for this gene is yhfE [H]

Identifier: 52784870

GI number: 52784870

Start: 1098645

End: 1099682

Strand: Direct

Name: yhfE [H]

Synonym: BLi01098

Alternate gene names: 52784870

Gene position: 1098645-1099682 (Clockwise)

Preceding gene: 52784868

Following gene: 52784873

Centisome position: 26.02

GC content: 49.13

Gene sequence:

>1038_bases
ATGTCAGGACAGAAAACGATGGAGCTCATCAAGGAGCTCGTCTCCATCCCGAGCCCTACCGGAAATACGTATGACATTAT
AGACTATATCAACCGCCTTTTAGAGAAAGAAGGAGTTGAAACAAGGCATAACCGTAAAGGCGGCCTGATCGCGACGATAC
CGGGCTCTGACAAATCCCGGCACAGGATGCTGACCGCTCATGTCGATACCCTCGGAGCTATGGTGAAAGAGATTAAACCG
AACGGAAGGCTGAAAATTGATTTAATCGGGGGCTTCAATTACAACTCGATTGAAGGCGAGTATTGCAACATTGAAACAGC
ATCTGGGAAAACTTACACCGGCACCATCTTAATGCATCAGACATCAGTGCATGTATACAAAGACGCCGGAAAAGCCGAGC
GGAACCAGAAAAATATGGAGGTCCGCATTGACGAACCGGTCAATAGTGAAGAAGAAACCCGGGCGCTCGGCATCAATGTC
GGCGATTTTATCTCCTTCGATCCGCGCGTTGAAATCACGCCGAGCGGGTTTATCAAATCGCGTCATCTCGACGATAAAGC
AAGCGTCGCCCTCCTCATCGAGCTGATCAGAACCATCAACACAGAAGGGATGACACTGCCTTATACGACGCACTTTTTAA
TTTCCAACAATGAAGAAATCGGTTATGGCGGCAACTCCAACATCCCGCCTGAAACGGTGGAATATTTGGCTGTTGATATG
GGAGCGATCGGCGATGGACAGTCAACAGATGAATATACGGTATCCATTTGTGTAAAGGATGCCAGCGGCCCATATCACTA
CGGGCTTCGAAAGCGCCTGACAGCCCTTTGTGAAGCACATGGAATCGATTATAAGCTTGATATTTACCCATACTACGGTT
CAGATGCTTCAGCGGCCGTCAAAGCGGGCCATGATATCGTCCACGGGCTGATCGGCCCGGGAATTGACGCATCCCATGCG
TTTGAAAGGACGCATCAATCGTCCTTGGAGCAGACGGCAAAGCTGCTGTATCACTATGTTCAGTCTGACATGGCATAA

Upstream 100 bases:

>100_bases
CACTCTCCTTTTTCTTATTATATCACCTAGTATTAGTATCTGGTACTAAAATGTTGATATGAGGTATACTATAACCATTA
CAAGTTGGGAGGAATGAACC

Downstream 100 bases:

>100_bases
AAAAGCTCCCAAAGGACCCCGGTCCCTTGGGAGTAAAAAAAGAGTGGAAGTCATCCATCCGTAAAGGATGGCGTTTACTT
ACCAGTAATCATAGTGTTTT

Product: YhfE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MSGQKTMELIKELVSIPSPTGNTYDIIDYINRLLEKEGVETRHNRKGGLIATIPGSDKSRHRMLTAHVDTLGAMVKEIKP
NGRLKIDLIGGFNYNSIEGEYCNIETASGKTYTGTILMHQTSVHVYKDAGKAERNQKNMEVRIDEPVNSEEETRALGINV
GDFISFDPRVEITPSGFIKSRHLDDKASVALLIELIRTINTEGMTLPYTTHFLISNNEEIGYGGNSNIPPETVEYLAVDM
GAIGDGQSTDEYTVSICVKDASGPYHYGLRKRLTALCEAHGIDYKLDIYPYYGSDASAAVKAGHDIVHGLIGPGIDASHA
FERTHQSSLEQTAKLLYHYVQSDMA

Sequences:

>Translated_345_residues
MSGQKTMELIKELVSIPSPTGNTYDIIDYINRLLEKEGVETRHNRKGGLIATIPGSDKSRHRMLTAHVDTLGAMVKEIKP
NGRLKIDLIGGFNYNSIEGEYCNIETASGKTYTGTILMHQTSVHVYKDAGKAERNQKNMEVRIDEPVNSEEETRALGINV
GDFISFDPRVEITPSGFIKSRHLDDKASVALLIELIRTINTEGMTLPYTTHFLISNNEEIGYGGNSNIPPETVEYLAVDM
GAIGDGQSTDEYTVSICVKDASGPYHYGLRKRLTALCEAHGIDYKLDIYPYYGSDASAAVKAGHDIVHGLIGPGIDASHA
FERTHQSSLEQTAKLLYHYVQSDMA
>Mature_344_residues
SGQKTMELIKELVSIPSPTGNTYDIIDYINRLLEKEGVETRHNRKGGLIATIPGSDKSRHRMLTAHVDTLGAMVKEIKPN
GRLKIDLIGGFNYNSIEGEYCNIETASGKTYTGTILMHQTSVHVYKDAGKAERNQKNMEVRIDEPVNSEEETRALGINVG
DFISFDPRVEITPSGFIKSRHLDDKASVALLIELIRTINTEGMTLPYTTHFLISNNEEIGYGGNSNIPPETVEYLAVDMG
AIGDGQSTDEYTVSICVKDASGPYHYGLRKRLTALCEAHGIDYKLDIYPYYGSDASAAVKAGHDIVHGLIGPGIDASHAF
ERTHQSSLEQTAKLLYHYVQSDMA

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI1790332, Length=287, Percent_Identity=25.0871080139373, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 38027; Mature: 37896

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGQKTMELIKELVSIPSPTGNTYDIIDYINRLLEKEGVETRHNRKGGLIATIPGSDKSR
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCEEEECCCCCCCH
HRMLTAHVDTLGAMVKEIKPNGRLKIDLIGGFNYNSIEGEYCNIETASGKTYTGTILMHQ
HEEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEEE
TSVHVYKDAGKAERNQKNMEVRIDEPVNSEEETRALGINVGDFISFDPRVEITPSGFIKS
CEEEEEECCCCCCCCCCCCEEEECCCCCCCCHHHEECCCHHHCCCCCCEEEECCCCCEEC
RHLDDKASVALLIELIRTINTEGMTLPYTTHFLISNNEEIGYGGNSNIPPETVEYLAVDM
CCCCCHHHHHHHHHHHHHCCCCCEECCEEEEEEEECCCEECCCCCCCCCHHHHHHHHHHH
GAIGDGQSTDEYTVSICVKDASGPYHYGLRKRLTALCEAHGIDYKLDIYPYYGSDASAAV
CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHH
KAGHDIVHGLIGPGIDASHAFERTHQSSLEQTAKLLYHYVQSDMA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGQKTMELIKELVSIPSPTGNTYDIIDYINRLLEKEGVETRHNRKGGLIATIPGSDKSR
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCEEEECCCCCCCH
HRMLTAHVDTLGAMVKEIKPNGRLKIDLIGGFNYNSIEGEYCNIETASGKTYTGTILMHQ
HEEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEEE
TSVHVYKDAGKAERNQKNMEVRIDEPVNSEEETRALGINVGDFISFDPRVEITPSGFIKS
CEEEEEECCCCCCCCCCCCEEEECCCCCCCCHHHEECCCHHHCCCCCCEEEECCCCCEEC
RHLDDKASVALLIELIRTINTEGMTLPYTTHFLISNNEEIGYGGNSNIPPETVEYLAVDM
CCCCCHHHHHHHHHHHHHCCCCCEECCEEEEEEEECCCEECCCCCCCCCHHHHHHHHHHH
GAIGDGQSTDEYTVSICVKDASGPYHYGLRKRLTALCEAHGIDYKLDIYPYYGSDASAAV
CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHH
KAGHDIVHGLIGPGIDASHAFERTHQSSLEQTAKLLYHYVQSDMA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]