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The map label for this gene is yxkF [H]

Identifier: 52784825

GI number: 52784825

Start: 1055917

End: 1056798

Strand: Reverse

Name: yxkF [H]

Synonym: BLi01053

Alternate gene names: 52784825

Gene position: 1056798-1055917 (Counterclockwise)

Preceding gene: 52784826

Following gene: 52784824

Centisome position: 25.03

GC content: 47.62

Gene sequence:

>882_bases
ATGCTGGAGAAATTAAAGACGCTTTACGGTGAACGGATGGTTGGATCTAAGGCTGTTTCAAAGCACGATGCATTATGGTT
TCAAACCGACGAAGGCGAAACTTTCGGCGTTTTGAAAAGCGCGGTCACCGACCGGGAAAAAGAGCTGCTCTATTGCCTAT
TCCGGCCTTTTTCAGAACCGCATCGTCCGCAGCAGCTGACAAAGCGGGAGAAAGAATGGCACGAATATTTCTTTTGCGAT
GCCCCCCTCCAAAACCCGGGAAACATTCAGCTGATTCAAGGCCATTTTTTTAAAATGGAGCATGCCCCTGAAGAAAGACA
GGCGATTAAAGAAGCGGTCAGCGGCTTTTTTAAAGACCCGCTTGTTGTATGGTACGACCGGCATGAAGCCGTTATCGTCC
ACGAAAATCCTTCACCGTTTCTCGCAAAAAAAGAGCTGTCCGAGCTTGCGGATGCACTGACAAGCGATTTCATGGCAACT
CCTGTGTTTTTCAGCGGCCAGCTTCATCCAGTCAACGGATCGCTTCAAGGCAAAATCCGCTTTGAAAAACAAATGTTTCA
TTACATGCTGGAAGCGGGTGACATCGGAAACGTCGCCACGTTTTGCCAGTGCCTCCCGTCTTTTTTGACGGCAAAACCGG
AGCGGGTTCATGCTTCTTCATTTTCGGACGCCGTAAGAGAAGCGCTGTCTGATCCCGAGACATCCCTGACCATCAAAACG
TATATGAGATGCAACCTGAATGCCTCTCTTACAGCCAAACGTTTGTTTATCCACCGAAACAGCCTGCAGTACAGAATTGA
TAAATTTATCGAACGGACTGCAATTGACATCAGACAGTTTGAAGAAGCAGCCGCTGTTTATTTGATGATGCATCTCCTTT
AG

Upstream 100 bases:

>100_bases
CAGCACCTATCCCCCGCATGATGACGAGCCTTCCCTGAAAAGCGAAATTCATGAATTAATGCTCTTCCATATTTACGAGT
AAAGAAAAGGACGTTGACGT

Downstream 100 bases:

>100_bases
CGGCTTCAGCAATATGCACGAAAAGAAATTGTGCACCATGTCCATTTACACCGCCCTGCCGTTTTTTATAAACTTAAATC
AGTTAAAGCGCTTACATAAA

Product: YxkF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MLEKLKTLYGERMVGSKAVSKHDALWFQTDEGETFGVLKSAVTDREKELLYCLFRPFSEPHRPQQLTKREKEWHEYFFCD
APLQNPGNIQLIQGHFFKMEHAPEERQAIKEAVSGFFKDPLVVWYDRHEAVIVHENPSPFLAKKELSELADALTSDFMAT
PVFFSGQLHPVNGSLQGKIRFEKQMFHYMLEAGDIGNVATFCQCLPSFLTAKPERVHASSFSDAVREALSDPETSLTIKT
YMRCNLNASLTAKRLFIHRNSLQYRIDKFIERTAIDIRQFEEAAAVYLMMHLL

Sequences:

>Translated_293_residues
MLEKLKTLYGERMVGSKAVSKHDALWFQTDEGETFGVLKSAVTDREKELLYCLFRPFSEPHRPQQLTKREKEWHEYFFCD
APLQNPGNIQLIQGHFFKMEHAPEERQAIKEAVSGFFKDPLVVWYDRHEAVIVHENPSPFLAKKELSELADALTSDFMAT
PVFFSGQLHPVNGSLQGKIRFEKQMFHYMLEAGDIGNVATFCQCLPSFLTAKPERVHASSFSDAVREALSDPETSLTIKT
YMRCNLNASLTAKRLFIHRNSLQYRIDKFIERTAIDIRQFEEAAAVYLMMHLL
>Mature_293_residues
MLEKLKTLYGERMVGSKAVSKHDALWFQTDEGETFGVLKSAVTDREKELLYCLFRPFSEPHRPQQLTKREKEWHEYFFCD
APLQNPGNIQLIQGHFFKMEHAPEERQAIKEAVSGFFKDPLVVWYDRHEAVIVHENPSPFLAKKELSELADALTSDFMAT
PVFFSGQLHPVNGSLQGKIRFEKQMFHYMLEAGDIGNVATFCQCLPSFLTAKPERVHASSFSDAVREALSDPETSLTIKT
YMRCNLNASLTAKRLFIHRNSLQYRIDKFIERTAIDIRQFEEAAAVYLMMHLL

Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33801; Mature: 33801

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKLKTLYGERMVGSKAVSKHDALWFQTDEGETFGVLKSAVTDREKELLYCLFRPFSEP
CHHHHHHHHHHHHHCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
HRPQQLTKREKEWHEYFFCDAPLQNPGNIQLIQGHFFKMEHAPEERQAIKEAVSGFFKDP
CCCHHHHHHHHHHHHEEEECCCCCCCCCEEEEECEEEECCCCCHHHHHHHHHHHHHHCCC
LVVWYDRHEAVIVHENPSPFLAKKELSELADALTSDFMATPVFFSGQLHPVNGSLQGKIR
EEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCEEEECCCCEEEEEE
FEKQMFHYMLEAGDIGNVATFCQCLPSFLTAKPERVHASSFSDAVREALSDPETSLTIKT
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE
YMRCNLNASLTAKRLFIHRNSLQYRIDKFIERTAIDIRQFEEAAAVYLMMHLL
EEEECCCCCHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLEKLKTLYGERMVGSKAVSKHDALWFQTDEGETFGVLKSAVTDREKELLYCLFRPFSEP
CHHHHHHHHHHHHHCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
HRPQQLTKREKEWHEYFFCDAPLQNPGNIQLIQGHFFKMEHAPEERQAIKEAVSGFFKDP
CCCHHHHHHHHHHHHEEEECCCCCCCCCEEEEECEEEECCCCCHHHHHHHHHHHHHHCCC
LVVWYDRHEAVIVHENPSPFLAKKELSELADALTSDFMATPVFFSGQLHPVNGSLQGKIR
EEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCEEEECCCCEEEEEE
FEKQMFHYMLEAGDIGNVATFCQCLPSFLTAKPERVHASSFSDAVREALSDPETSLTIKT
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE
YMRCNLNASLTAKRLFIHRNSLQYRIDKFIERTAIDIRQFEEAAAVYLMMHLL
EEEECCCCCHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]