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The map label for this gene is sspB [H]

Identifier: 52784822

GI number: 52784822

Start: 1053986

End: 1054189

Strand: Reverse

Name: sspB [H]

Synonym: BLi01050

Alternate gene names: 52784822

Gene position: 1054189-1053986 (Counterclockwise)

Preceding gene: 52784824

Following gene: 52784821

Centisome position: 24.97

GC content: 45.59

Gene sequence:

>204_bases
ATGGCTAATCAAAATTCTTCAAATCAACTGCTTGTCCCAGGAGCAGCGCAAGCGATCGAACAAATGAAATTCGAAATCGC
TTCTGAGTTCGGCGTAAACCTTGGCGCTGACACGACTTCCCGTGCAAACGGTTCTGTCGGCGGAGAAATTACAAAACGTT
TAGTTTCCCAAGCTCAAGCATCTATGGGCGGTCAACAATTTTAA

Upstream 100 bases:

>100_bases
TTAGCCGAGAAGGCAGCGGTTTTCTATCGGTGGAAGCCGTCAGCTGGTGCAACTCCAGTCAGCCCAACCATACCATTTTT
ATAAAGGAGTTTGATGACAA

Downstream 100 bases:

>100_bases
ACAACTTCATATTCATGGATAACAGAAGGTGCATATACTGCACCTTCTTTAGCTTTTCGGCAAACCTTCTCATTCATTAC
CATCACGGGGGCCTCCCCTC

Product: SspB

Products: NA

Alternate protein names: SASP [H]

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MANQNSSNQLLVPGAAQAIEQMKFEIASEFGVNLGADTTSRANGSVGGEITKRLVSQAQASMGGQQF

Sequences:

>Translated_67_residues
MANQNSSNQLLVPGAAQAIEQMKFEIASEFGVNLGADTTSRANGSVGGEITKRLVSQAQASMGGQQF
>Mature_66_residues
ANQNSSNQLLVPGAAQAIEQMKFEIASEFGVNLGADTTSRANGSVGGEITKRLVSQAQASMGGQQF

Specific function: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to U

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alpha/beta-type SASP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001448
- InterPro:   IPR018126 [H]

Pfam domain/function: PF00269 SASP [H]

EC number: NA

Molecular weight: Translated: 6944; Mature: 6813

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00304 SASP_1 ; PS00684 SASP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQNSSNQLLVPGAAQAIEQMKFEIASEFGVNLGADTTSRANGSVGGEITKRLVSQAQA
CCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
SMGGQQF
HCCCCCC
>Mature Secondary Structure 
ANQNSSNQLLVPGAAQAIEQMKFEIASEFGVNLGADTTSRANGSVGGEITKRLVSQAQA
CCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
SMGGQQF
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3009398; 9579061; 9384377 [H]