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The map label for this gene is yazB [H]

Identifier: 52784719

GI number: 52784719

Start: 948509

End: 948715

Strand: Reverse

Name: yazB [H]

Synonym: BLi00946

Alternate gene names: 52784719

Gene position: 948715-948509 (Counterclockwise)

Preceding gene: 52784726

Following gene: 52784718

Centisome position: 22.47

GC content: 43.0

Gene sequence:

>207_bases
ATGAACAACAGGGTAAGAGAATTGAGAGCAAGATACGGGTATTCACAGGAAGCCCTTGCAAAGGCGATCGGGGTTACAAG
GCAGACGGTTGCGGCCATTGAAAAAGGCAATTACATACCGTCGCTTCTTTTGGCTTTGAAAATTTGCAAGGAATTTCAAT
TAAAAATGGAAGACGTATTTTGGCTAGAGGGGGACAAAAACGAATGA

Upstream 100 bases:

>100_bases
AAAGATATTGATTACATTGTAAAAACAAGTTAACATTATGTCAAATCTATTTAACAATATGTCAAATATACTATATAAAC
GAAGAATTGCAGGTGGTAGG

Downstream 100 bases:

>100_bases
ATATGATAACACGGACTTTCTTTCACATCCTTCTGTTCGGACTCGCATGCTGGACGTTTATAACCTTTTTCCACACATCG
GAACAAATTGCCAAAAGCCT

Product: YazB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MNNRVRELRARYGYSQEALAKAIGVTRQTVAAIEKGNYIPSLLLALKICKEFQLKMEDVFWLEGDKNE

Sequences:

>Translated_68_residues
MNNRVRELRARYGYSQEALAKAIGVTRQTVAAIEKGNYIPSLLLALKICKEFQLKMEDVFWLEGDKNE
>Mature_68_residues
MNNRVRELRARYGYSQEALAKAIGVTRQTVAAIEKGNYIPSLLLALKICKEFQLKMEDVFWLEGDKNE

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7832; Mature: 7832

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRVRELRARYGYSQEALAKAIGVTRQTVAAIEKGNYIPSLLLALKICKEFQLKMEDVF
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHE
WLEGDKNE
EECCCCCC
>Mature Secondary Structure
MNNRVRELRARYGYSQEALAKAIGVTRQTVAAIEKGNYIPSLLLALKICKEFQLKMEDVF
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHE
WLEGDKNE
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]