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The map label for this gene is yfhF [H]

Identifier: 52784674

GI number: 52784674

Start: 895489

End: 896391

Strand: Reverse

Name: yfhF [H]

Synonym: BLi00876

Alternate gene names: 52784674

Gene position: 896391-895489 (Counterclockwise)

Preceding gene: 52784677

Following gene: 52784673

Centisome position: 21.23

GC content: 51.94

Gene sequence:

>903_bases
ATGATGAAGATTGCGATTGCCGGGGGGACAGGTTTTATCGGCAGACATTTGACAAACGCCTTAACCGCCCGGGGACATCA
CGTCTATATTTTAACAAGAAAACCGGCCGAAACCGAACAAAAAAACACTTCTTTCGTTCTCTGGCAAAAAAACGGCGCCC
GTCCTGAAAAAGATCTGACCGATATCGATGTTTGGATCAATTTAGCCGGAAAATCGCTTTTCGGCCGTTGGAATGAAAAA
ACGAAGGCGGAGATCGCGACAAGCCGCCTCCGCTCTGTGGAGGAGTCGGCCCGCATCATACAAAGTCTTCAGAAGAAGCC
GAACACCCTCATTCAGGCGAGCGCAGTCGGAATTTACGGAACCAGTCTTGAACAGACATTCACGGAGGAATCTCCAGTTT
CGGCTGAGGATTTTTTAAGCAGAACGACAGCTTTGTGGGAACAGGCAGCCGAACCAATCGAAGCGCTTGGCATCCGCACC
GTCTGGATGCGTTTTGGCCTTGTGCTTGGAAAAGACGGAGGCGCGCTCCCGAAAATGGCGCTCCCCTATCAATTGTTTGC
AGGCGGACGCATCGGCTCGGGGCGGCAATGGGTGCCATGGATTCATATCGAAGACGCCGTCGGCATGATTTTATCTGCGA
TTGAACAGACGCTGATGTCCGGCCCCGTCAATGTCACGGCACCGAATCCCGTTCAGATGGATACATTCGGGCAAACCGTC
GCGAAAGTAGAAAAACGCCCACACTGGCTCCCGGTTCCCGAATTTGCGATAAAAGGCGTACTTGGAGAAATGAGCATGCT
CGTGCTGAAAGGACAGCGCGTCCTCCCGAAAAAAGCGCTTCAGAACGGCTATCATTTCTTATATCCCGATCTGGAAGATG
CCCTGCACAACCTTCTGGCATAA

Upstream 100 bases:

>100_bases
TTTTTCTGGGCAGAAATCTTTGTAATATATGGCATAAATAACTCCCTTCTTTTGTTTTCTTCTTTTACAATAAGGTTAAT
GATCATGAAAGGGAGGAATC

Downstream 100 bases:

>100_bases
AAGGCGTTTTCCGGCAAAATCCTTGTAGCTTTTCCTTTCCCAGCTGCGTAAAATGTAAGTATCTTTTTAGCAGCATACAC
GTACAGGGAAGGCAAATGGT

Product: YfhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MMKIAIAGGTGFIGRHLTNALTARGHHVYILTRKPAETEQKNTSFVLWQKNGARPEKDLTDIDVWINLAGKSLFGRWNEK
TKAEIATSRLRSVEESARIIQSLQKKPNTLIQASAVGIYGTSLEQTFTEESPVSAEDFLSRTTALWEQAAEPIEALGIRT
VWMRFGLVLGKDGGALPKMALPYQLFAGGRIGSGRQWVPWIHIEDAVGMILSAIEQTLMSGPVNVTAPNPVQMDTFGQTV
AKVEKRPHWLPVPEFAIKGVLGEMSMLVLKGQRVLPKKALQNGYHFLYPDLEDALHNLLA

Sequences:

>Translated_300_residues
MMKIAIAGGTGFIGRHLTNALTARGHHVYILTRKPAETEQKNTSFVLWQKNGARPEKDLTDIDVWINLAGKSLFGRWNEK
TKAEIATSRLRSVEESARIIQSLQKKPNTLIQASAVGIYGTSLEQTFTEESPVSAEDFLSRTTALWEQAAEPIEALGIRT
VWMRFGLVLGKDGGALPKMALPYQLFAGGRIGSGRQWVPWIHIEDAVGMILSAIEQTLMSGPVNVTAPNPVQMDTFGQTV
AKVEKRPHWLPVPEFAIKGVLGEMSMLVLKGQRVLPKKALQNGYHFLYPDLEDALHNLLA
>Mature_300_residues
MMKIAIAGGTGFIGRHLTNALTARGHHVYILTRKPAETEQKNTSFVLWQKNGARPEKDLTDIDVWINLAGKSLFGRWNEK
TKAEIATSRLRSVEESARIIQSLQKKPNTLIQASAVGIYGTSLEQTFTEESPVSAEDFLSRTTALWEQAAEPIEALGIRT
VWMRFGLVLGKDGGALPKMALPYQLFAGGRIGSGRQWVPWIHIEDAVGMILSAIEQTLMSGPVNVTAPNPVQMDTFGQTV
AKVEKRPHWLPVPEFAIKGVLGEMSMLVLKGQRVLPKKALQNGYHFLYPDLEDALHNLLA

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=303, Percent_Identity=35.3135313531353, Blast_Score=189, Evalue=3e-48,
Organism=Escherichia coli, GI1788642, Length=304, Percent_Identity=39.4736842105263, Blast_Score=196, Evalue=1e-51,
Organism=Drosophila melanogaster, GI28573846, Length=297, Percent_Identity=33.3333333333333, Blast_Score=162, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33150; Mature: 33150

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKIAIAGGTGFIGRHLTNALTARGHHVYILTRKPAETEQKNTSFVLWQKNGARPEKDLT
CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCC
DIDVWINLAGKSLFGRWNEKTKAEIATSRLRSVEESARIIQSLQKKPNTLIQASAVGIYG
CEEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHCCEEEC
TSLEQTFTEESPVSAEDFLSRTTALWEQAAEPIEALGIRTVWMRFGLVLGKDGGALPKMA
CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
LPYQLFAGGRIGSGRQWVPWIHIEDAVGMILSAIEQTLMSGPVNVTAPNPVQMDTFGQTV
CCHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHH
AKVEKRPHWLPVPEFAIKGVLGEMSMLVLKGQRVLPKKALQNGYHFLYPDLEDALHNLLA
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEECCCHHHHHHHHCC
>Mature Secondary Structure
MMKIAIAGGTGFIGRHLTNALTARGHHVYILTRKPAETEQKNTSFVLWQKNGARPEKDLT
CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCC
DIDVWINLAGKSLFGRWNEKTKAEIATSRLRSVEESARIIQSLQKKPNTLIQASAVGIYG
CEEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHCCEEEC
TSLEQTFTEESPVSAEDFLSRTTALWEQAAEPIEALGIRTVWMRFGLVLGKDGGALPKMA
CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
LPYQLFAGGRIGSGRQWVPWIHIEDAVGMILSAIEQTLMSGPVNVTAPNPVQMDTFGQTV
CCHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHH
AKVEKRPHWLPVPEFAIKGVLGEMSMLVLKGQRVLPKKALQNGYHFLYPDLEDALHNLLA
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]