| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
Click here to switch to the map view.
The map label for this gene is hsdM [H]
Identifier: 52784543
GI number: 52784543
Start: 750004
End: 751596
Strand: Direct
Name: hsdM [H]
Synonym: BLi00744
Alternate gene names: 52784543
Gene position: 750004-751596 (Clockwise)
Preceding gene: 52784542
Following gene: 52784544
Centisome position: 17.76
GC content: 37.04
Gene sequence:
>1593_bases ATGGCTGAATTACACTCAAAACTCTTTAGTGCCGCAGACAACTTGCGAAGTAAAATGGATGCATCAGAATATAAAAACTA TTTATTAGGTTTAATCTTTTACAAATATTTATCTGATAAATTATTAGAAAAAGTAGTAGAAATAGCGGGTGAATCGTTAG AAGAATACAACACACAAGACAAACAAACTCAATTGTATATGGAATCCTTGGCAGATGAAGAGATAAAAAATGACTTGATT GAAACGTTAGTCGACACATTGGGCTATGATATTGAACCAAAGTATTTATTCAGTGTATTAGCCAACCAAGCGAAACAAAA CACGTTTCATCTGAATGACTTGAATAAGGCATTTATCGATTTGTCTACGAAATATGACCAATTTAACGGTCTGTTTGATG ATGTGGATTTGAAATCGAAAAAACTGGGGTCGGATGATCCACAACGGAACATTACCATTACTGAAGTACTGAAGAAACTA AATGATGTCAATGTGATAGAACATAATGGTGATGTTATTGGGGATGCCTATGAGTACTTAATTAGTCAATTTGCCTCAGA GGCTGGTAAGAAAGCGGGGGAATTTTACACCCCTCATCAAGTATCTGACATGATGGCTCGTATTGCCGCGATTGGTCAAG AAGACAAAAAATTGTTTAGCGTATTTGACCCAACGATGGGATCTGGTTCTTTAATGTTGAATATTCGAAACTATATTAAT TATCCAGATAGTGTGAAATATCATGGGCAAGAACTAAACACAACAACTTTTAATCTAGCGAAGATGAACTTGATCTTGCA TGGTGTTAATAAAGAAGATATGCGGTTACGCAATGGGGATACATTGAATAAAGATTGGCCGACAGATGAGCCTTATACTT TTGATGCCGTCCTTATGAATCCACCATACTCTGCAAAATGGTCTGCAGATACTACATTCATAGATGATTCGCGTTTCAAT CGTTACGGAAAGTTAGCGCCGAAATCAAAAGCCGACTTTGCTTTTCTTTTACATGGGTTCTATCATTTGAAAGATTCGGG AACAATGGCCATCGTCTTACCGCATGGGGTCCTGTTCCGTGGAGCTGCAGAAGGTGTGATTCGTAAGAAATTATTAGAAG ATGGGAGCATTGATGCTGTAATCGGCATGCCAGCAAACTTATTCTTTGGGACATCGATCCCAACAACAGTCATCATCTTG AAGAAAAACCGCAGCACTCGTGATGTGTTATTTATTGATGCAAGTAAGGAGTTTATTAAAGGAAAGAACCAAAATAAACT TTCTAAAGAAAACATTGATAAGATTGTCGAAACGTATAAGAAACGAGAAGATGTCGAGAAATATGCCCACGTTGCAACTT TCGAGGAAATCAAGGAGAATGATTTCAATTTGAACATCCCTCGATACGTAGATACCTTTGAAGAAGAAGAACCTATTGAT ATGGCTGCAATTGGCTCAAAGATTAAAGATATTCGAATAGAAAAAGCAGAACTAGAGTCTAGCCTATATGACATGATTTC TTCGCTACAATATGATGAAGAAAATGCTGACTGGATCAAGGGTGCGTTAGAGGTGTTTAATCGTGGAAAATAA
Upstream 100 bases:
>100_bases GTCAAGCTTTGGCAAAGAAGCAAGCAGAACTTGAAGAGAAACTTTTTTTAGAAGTATTAAAACAATTAGACCAACAATAG AAAAAGTGAGGAACACAACC
Downstream 100 bases:
>100_bases GCGAGTACCAGAGCTTCGATTTGCGGGATTTGCTGGAGATTGGGAAGAGCGTAAGTTAGGAGAATTAGTAGAAATTAAAT CTGGTTGGACACCTTCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: M.EcoR124II [H]
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MAELHSKLFSAADNLRSKMDASEYKNYLLGLIFYKYLSDKLLEKVVEIAGESLEEYNTQDKQTQLYMESLADEEIKNDLI ETLVDTLGYDIEPKYLFSVLANQAKQNTFHLNDLNKAFIDLSTKYDQFNGLFDDVDLKSKKLGSDDPQRNITITEVLKKL NDVNVIEHNGDVIGDAYEYLISQFASEAGKKAGEFYTPHQVSDMMARIAAIGQEDKKLFSVFDPTMGSGSLMLNIRNYIN YPDSVKYHGQELNTTTFNLAKMNLILHGVNKEDMRLRNGDTLNKDWPTDEPYTFDAVLMNPPYSAKWSADTTFIDDSRFN RYGKLAPKSKADFAFLLHGFYHLKDSGTMAIVLPHGVLFRGAAEGVIRKKLLEDGSIDAVIGMPANLFFGTSIPTTVIIL KKNRSTRDVLFIDASKEFIKGKNQNKLSKENIDKIVETYKKREDVEKYAHVATFEEIKENDFNLNIPRYVDTFEEEEPID MAAIGSKIKDIRIEKAELESSLYDMISSLQYDEENADWIKGALEVFNRGK
Sequences:
>Translated_530_residues MAELHSKLFSAADNLRSKMDASEYKNYLLGLIFYKYLSDKLLEKVVEIAGESLEEYNTQDKQTQLYMESLADEEIKNDLI ETLVDTLGYDIEPKYLFSVLANQAKQNTFHLNDLNKAFIDLSTKYDQFNGLFDDVDLKSKKLGSDDPQRNITITEVLKKL NDVNVIEHNGDVIGDAYEYLISQFASEAGKKAGEFYTPHQVSDMMARIAAIGQEDKKLFSVFDPTMGSGSLMLNIRNYIN YPDSVKYHGQELNTTTFNLAKMNLILHGVNKEDMRLRNGDTLNKDWPTDEPYTFDAVLMNPPYSAKWSADTTFIDDSRFN RYGKLAPKSKADFAFLLHGFYHLKDSGTMAIVLPHGVLFRGAAEGVIRKKLLEDGSIDAVIGMPANLFFGTSIPTTVIIL KKNRSTRDVLFIDASKEFIKGKNQNKLSKENIDKIVETYKKREDVEKYAHVATFEEIKENDFNLNIPRYVDTFEEEEPID MAAIGSKIKDIRIEKAELESSLYDMISSLQYDEENADWIKGALEVFNRGK >Mature_529_residues AELHSKLFSAADNLRSKMDASEYKNYLLGLIFYKYLSDKLLEKVVEIAGESLEEYNTQDKQTQLYMESLADEEIKNDLIE TLVDTLGYDIEPKYLFSVLANQAKQNTFHLNDLNKAFIDLSTKYDQFNGLFDDVDLKSKKLGSDDPQRNITITEVLKKLN DVNVIEHNGDVIGDAYEYLISQFASEAGKKAGEFYTPHQVSDMMARIAAIGQEDKKLFSVFDPTMGSGSLMLNIRNYINY PDSVKYHGQELNTTTFNLAKMNLILHGVNKEDMRLRNGDTLNKDWPTDEPYTFDAVLMNPPYSAKWSADTTFIDDSRFNR YGKLAPKSKADFAFLLHGFYHLKDSGTMAIVLPHGVLFRGAAEGVIRKKLLEDGSIDAVIGMPANLFFGTSIPTTVIILK KNRSTRDVLFIDASKEFIKGKNQNKLSKENIDKIVETYKKREDVEKYAHVATFEEIKENDFNLNIPRYVDTFEEEEPIDM AAIGSKIKDIRIEKAELESSLYDMISSLQYDEENADWIKGALEVFNRGK
Specific function: Methylation of specific adenine residues; required for both restriction and modification activities. The EcoR124/3 I enzyme recognizes 5'-GAAN(7)RTCG-3' [H]
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1790808, Length=326, Percent_Identity=22.6993865030675, Blast_Score=72, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022749 - InterPro: IPR003356 - InterPro: IPR002052 - InterPro: IPR002296 - InterPro: IPR004546 [H]
Pfam domain/function: PF12161 HsdM_N; PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 60366; Mature: 60235
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELHSKLFSAADNLRSKMDASEYKNYLLGLIFYKYLSDKLLEKVVEIAGESLEEYNTQD CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH KQTQLYMESLADEEIKNDLIETLVDTLGYDIEPKYLFSVLANQAKQNTFHLNDLNKAFID HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHH LSTKYDQFNGLFDDVDLKSKKLGSDDPQRNITITEVLKKLNDVNVIEHNGDVIGDAYEYL HCCCHHHHCCCCCCCCCCHHHCCCCCCCCCEEHHHHHHHHCCCCEEECCCCCCHHHHHHH ISQFASEAGKKAGEFYTPHQVSDMMARIAAIGQEDKKLFSVFDPTMGSGSLMLNIRNYIN HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEHHHCC YPDSVKYHGQELNTTTFNLAKMNLILHGVNKEDMRLRNGDTLNKDWPTDEPYTFDAVLMN CCCCCCCCCCCCCCCEEHHEEEEEEEECCCHHHCEECCCCCCCCCCCCCCCEEEEEEEEC PPYSAKWSADTTFIDDSRFNRYGKLAPKSKADFAFLLHGFYHLKDSGTMAIVLPHGVLFR CCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCHHHHHHHHHEECCCCCEEEEECCCHHHH GAAEGVIRKKLLEDGSIDAVIGMPANLFFGTSIPTTVIILKKNRSTRDVLFIDASKEFIK HHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCEEEEEEECCCCCCEEEEEECCHHHHC GKNQNKLSKENIDKIVETYKKREDVEKYAHVATFEEIKENDFNLNIPRYVDTFEEEEPID CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCC MAAIGSKIKDIRIEKAELESSLYDMISSLQYDEENADWIKGALEVFNRGK HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure AELHSKLFSAADNLRSKMDASEYKNYLLGLIFYKYLSDKLLEKVVEIAGESLEEYNTQD CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH KQTQLYMESLADEEIKNDLIETLVDTLGYDIEPKYLFSVLANQAKQNTFHLNDLNKAFID HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHH LSTKYDQFNGLFDDVDLKSKKLGSDDPQRNITITEVLKKLNDVNVIEHNGDVIGDAYEYL HCCCHHHHCCCCCCCCCCHHHCCCCCCCCCEEHHHHHHHHCCCCEEECCCCCCHHHHHHH ISQFASEAGKKAGEFYTPHQVSDMMARIAAIGQEDKKLFSVFDPTMGSGSLMLNIRNYIN HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEHHHCC YPDSVKYHGQELNTTTFNLAKMNLILHGVNKEDMRLRNGDTLNKDWPTDEPYTFDAVLMN CCCCCCCCCCCCCCCEEHHEEEEEEEECCCHHHCEECCCCCCCCCCCCCCCEEEEEEEEC PPYSAKWSADTTFIDDSRFNRYGKLAPKSKADFAFLLHGFYHLKDSGTMAIVLPHGVLFR CCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCHHHHHHHHHEECCCCCEEEEECCCHHHH GAAEGVIRKKLLEDGSIDAVIGMPANLFFGTSIPTTVIILKKNRSTRDVLFIDASKEFIK HHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCEEEEEEECCCCCCEEEEEECCHHHHC GKNQNKLSKENIDKIVETYKKREDVEKYAHVATFEEIKENDFNLNIPRYVDTFEEEEPID CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCC MAAIGSKIKDIRIEKAELESSLYDMISSLQYDEENADWIKGALEVFNRGK HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2784505 [H]