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The map label for this gene is yrhP [H]

Identifier: 52784449

GI number: 52784449

Start: 648910

End: 649542

Strand: Direct

Name: yrhP [H]

Synonym: BLi00646

Alternate gene names: 52784449

Gene position: 648910-649542 (Clockwise)

Preceding gene: 52784447

Following gene: 52784450

Centisome position: 15.37

GC content: 43.6

Gene sequence:

>633_bases
ATGGATAGCCTGCTGTCATACATATCGATTGCAGCCATGATGGTGGTGATACCCGGAGCCGATACGATGCTTGTGGTGAA
AAACACGCTTCGATACGGTCCGAACGCCGGGCGCTGCAATGTTCTCGGCTTGGCGACGGGGCTTTCTTTCTGGACGCTGA
TTGCCGTTCTCGGCTTAGCGGTGGTGATTGCGAAATCGGTGATTCTGTTCAATACGATCAAATACTTGGGGGCGGCCTAT
TTAATATATTTAGGCATTAAAAGCTTTTTCGCGAAAAAAATGTTTTCTTTGGAAGAGATACAAGCCGAGAAGAACAAAAA
CGAAAACGCATCAAGCCGGCATTATAAGGATTCTTTTATGCAAGGATTGTTCAGCAACATTCTGAATCCGAAAACTGTTT
TGGTCTATATCACGATTATGCCTCAATTTATTAACTTAAGAGAAAGCGTCAACCAGCAGTTGATCATCCTCGCTTTAATC
CTTACTTTTCTTGCTGTGTTTTGGTTCCTCATCCTCGTATATTTGATCGATTTCGCAAAGAAATGGCTGAGAAGCGTGAA
ATTCCAGAAGATCTTTCAAAAAGCTGCGGGTCTGGTGCTTGTCGGATTTGGCGTTAAAACGGGTTTAGATTGA

Upstream 100 bases:

>100_bases
TTGCTGGATGTATTGATTTATTTCAAGTCCGCTGATACACTTTTTATAAGTGGTTACTTGAGTAGTCACTATATAAAAAC
AGTATGGGGGGAGACATCTG

Downstream 100 bases:

>100_bases
TATTGGAGAACGAGTGAGCGCTTTGGCTCACTTTTTTTGTTTATTTGTCAACGATTATTTGATAGAAAACACTAGATGAA
ATAAGAGTGCTATGGTTATT

Product: YrhP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MDSLLSYISIAAMMVVIPGADTMLVVKNTLRYGPNAGRCNVLGLATGLSFWTLIAVLGLAVVIAKSVILFNTIKYLGAAY
LIYLGIKSFFAKKMFSLEEIQAEKNKNENASSRHYKDSFMQGLFSNILNPKTVLVYITIMPQFINLRESVNQQLIILALI
LTFLAVFWFLILVYLIDFAKKWLRSVKFQKIFQKAAGLVLVGFGVKTGLD

Sequences:

>Translated_210_residues
MDSLLSYISIAAMMVVIPGADTMLVVKNTLRYGPNAGRCNVLGLATGLSFWTLIAVLGLAVVIAKSVILFNTIKYLGAAY
LIYLGIKSFFAKKMFSLEEIQAEKNKNENASSRHYKDSFMQGLFSNILNPKTVLVYITIMPQFINLRESVNQQLIILALI
LTFLAVFWFLILVYLIDFAKKWLRSVKFQKIFQKAAGLVLVGFGVKTGLD
>Mature_210_residues
MDSLLSYISIAAMMVVIPGADTMLVVKNTLRYGPNAGRCNVLGLATGLSFWTLIAVLGLAVVIAKSVILFNTIKYLGAAY
LIYLGIKSFFAKKMFSLEEIQAEKNKNENASSRHYKDSFMQGLFSNILNPKTVLVYITIMPQFINLRESVNQQLIILALI
LTFLAVFWFLILVYLIDFAKKWLRSVKFQKIFQKAAGLVLVGFGVKTGLD

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=203, Percent_Identity=29.064039408867, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI48994979, Length=154, Percent_Identity=27.9220779220779, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI48994978, Length=206, Percent_Identity=25.2427184466019, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786522, Length=164, Percent_Identity=27.4390243902439, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 23461; Mature: 23461

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLLSYISIAAMMVVIPGADTMLVVKNTLRYGPNAGRCNVLGLATGLSFWTLIAVLGLA
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
VVIAKSVILFNTIKYLGAAYLIYLGIKSFFAKKMFSLEEIQAEKNKNENASSRHYKDSFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
QGLFSNILNPKTVLVYITIMPQFINLRESVNQQLIILALILTFLAVFWFLILVYLIDFAK
HHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KWLRSVKFQKIFQKAAGLVLVGFGVKTGLD
HHHHHHHHHHHHHHHCCEEEEECCHHCCCC
>Mature Secondary Structure
MDSLLSYISIAAMMVVIPGADTMLVVKNTLRYGPNAGRCNVLGLATGLSFWTLIAVLGLA
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
VVIAKSVILFNTIKYLGAAYLIYLGIKSFFAKKMFSLEEIQAEKNKNENASSRHYKDSFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
QGLFSNILNPKTVLVYITIMPQFINLRESVNQQLIILALILTFLAVFWFLILVYLIDFAK
HHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KWLRSVKFQKIFQKAAGLVLVGFGVKTGLD
HHHHHHHHHHHHHHHCCEEEEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]