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The map label for this gene is ydjI [H]

Identifier: 52784446

GI number: 52784446

Start: 645614

End: 646588

Strand: Direct

Name: ydjI [H]

Synonym: BLi00643

Alternate gene names: 52784446

Gene position: 645614-646588 (Clockwise)

Preceding gene: 52784445

Following gene: 52784447

Centisome position: 15.29

GC content: 45.74

Gene sequence:

>975_bases
ATGGTGTTTTTTAGAAATCAATTTGCAAATGTAGTAGAGTGGGATGAATTTCGCGATGATATGATTTTCTATAAATGGAA
CAACCGCGAAATCAAAAAGGGGAGCCGGCTGATCATTCGCCCCGGTCAGGATGCCGTCTTTTTAAACAACGGAAAAATTG
AAGGCATTTTCCAGGATGAGGGCGACTATGATATTGAATCCGAAATTATTCCTTTTTTATCCACTTTAAAAGGTTTTAAA
TTTGGCTTTAACAGCGGGATGCGCGCCGAAGTCCTGTTTGTCAACACGAAGGAATTTACCGTCAAGTGGGGGACGAAGAA
TGCCATCAATATCCCGGCTGCAGGACTTCCGGGCGGCATGCCGATCAGGGCGAACGGAAGATTTAACTTTAAGGTGAATG
ATTATGTCGCATTAATCGATAAAATTGCCGGTGTGAAAGATCAGTATGTTGTGGAAGATATCAAAATACGGATCACATCC
ATTCTCGATCAGCTTCTGATGAAGTGGATCACAAAAGAAGGAAAAGATATGTTCAACCTTCAAGCCAACGCCTTTGATAT
CGCAAAGGGAATCAAGGAAGATCTTGATATGGAGATTGTCGGCGACGGCATGACGATAACAGGCTTTAACATCATGAGTT
TCAATTATCCGAAAGAAGTCCAGGACATGATCACGAAAAACGCTTCCCACGGCATGGTCGGCGATCTGAACAGATATCAG
CAGATTTCAATGACAGACGGCATGGCTTCAGGAAAGATGACAGGCGGCGGTGCCGCATCTGACATGGCCGGCATGATGAT
GGGGATGAACGTGGCGAACCAAATGATGAATCAGATGAACCAAAATCAGCAGGCGCAAACACAGACGCCACCAAGCGCGC
CGCAGCCAGCGGCAAAACCGAACTTCTGTCCAAACTGCGGAACGAAAACGGGCGAAGCCAATTTCTGTCCGAACTGCGGT
CAGAAGCTAGTGTAA

Upstream 100 bases:

>100_bases
ACCGTCCAATAATAAAAGCTCAGGCGGCGGAACGACGAGCGGAGGCCATTCGCACAGCGGCAGCCGGGGAAGCTTTTAGA
AAGGGAAAGGAAGAGCTTAA

Downstream 100 bases:

>100_bases
GCGGGGGGATCGGTTGATGCCGGCAAAGTTGGTATCTTCTATGTGAATGAGGGCTTTCGCTGCCGGCACGATCGCCGGCA
TACCAAGCCGGAAACTGATG

Product: YdjI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MVFFRNQFANVVEWDEFRDDMIFYKWNNREIKKGSRLIIRPGQDAVFLNNGKIEGIFQDEGDYDIESEIIPFLSTLKGFK
FGFNSGMRAEVLFVNTKEFTVKWGTKNAINIPAAGLPGGMPIRANGRFNFKVNDYVALIDKIAGVKDQYVVEDIKIRITS
ILDQLLMKWITKEGKDMFNLQANAFDIAKGIKEDLDMEIVGDGMTITGFNIMSFNYPKEVQDMITKNASHGMVGDLNRYQ
QISMTDGMASGKMTGGGAASDMAGMMMGMNVANQMMNQMNQNQQAQTQTPPSAPQPAAKPNFCPNCGTKTGEANFCPNCG
QKLV

Sequences:

>Translated_324_residues
MVFFRNQFANVVEWDEFRDDMIFYKWNNREIKKGSRLIIRPGQDAVFLNNGKIEGIFQDEGDYDIESEIIPFLSTLKGFK
FGFNSGMRAEVLFVNTKEFTVKWGTKNAINIPAAGLPGGMPIRANGRFNFKVNDYVALIDKIAGVKDQYVVEDIKIRITS
ILDQLLMKWITKEGKDMFNLQANAFDIAKGIKEDLDMEIVGDGMTITGFNIMSFNYPKEVQDMITKNASHGMVGDLNRYQ
QISMTDGMASGKMTGGGAASDMAGMMMGMNVANQMMNQMNQNQQAQTQTPPSAPQPAAKPNFCPNCGTKTGEANFCPNCG
QKLV
>Mature_324_residues
MVFFRNQFANVVEWDEFRDDMIFYKWNNREIKKGSRLIIRPGQDAVFLNNGKIEGIFQDEGDYDIESEIIPFLSTLKGFK
FGFNSGMRAEVLFVNTKEFTVKWGTKNAINIPAAGLPGGMPIRANGRFNFKVNDYVALIDKIAGVKDQYVVEDIKIRITS
ILDQLLMKWITKEGKDMFNLQANAFDIAKGIKEDLDMEIVGDGMTITGFNIMSFNYPKEVQDMITKNASHGMVGDLNRYQ
QISMTDGMASGKMTGGGAASDMAGMMMGMNVANQMMNQMNQNQQAQTQTPPSAPQPAAKPNFCPNCGTKTGEANFCPNCG
QKLV

Specific function: Unknown

COG id: COG4260

COG function: function code S; Putative virion core protein (lumpy skin disease virus)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 36114; Mature: 36114

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFFRNQFANVVEWDEFRDDMIFYKWNNREIKKGSRLIIRPGQDAVFLNNGKIEGIFQDE
CEEECCHHCCHHCHHHCCCCEEEEEECCCEECCCCEEEEECCCCEEEEECCEEEEEEECC
GDYDIESEIIPFLSTLKGFKFGFNSGMRAEVLFVNTKEFTVKWGTKNAINIPAAGLPGGM
CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEEEECCCCCEECCCCCCCCCC
PIRANGRFNFKVNDYVALIDKIAGVKDQYVVEDIKIRITSILDQLLMKWITKEGKDMFNL
EEEECCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
QANAFDIAKGIKEDLDMEIVGDGMTITGFNIMSFNYPKEVQDMITKNASHGMVGDLNRYQ
CCCHHHHHHHHHHHCCEEEECCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCHHE
QISMTDGMASGKMTGGGAASDMAGMMMGMNVANQMMNQMNQNQQAQTQTPPSAPQPAAKP
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCC
NFCPNCGTKTGEANFCPNCGQKLV
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVFFRNQFANVVEWDEFRDDMIFYKWNNREIKKGSRLIIRPGQDAVFLNNGKIEGIFQDE
CEEECCHHCCHHCHHHCCCCEEEEEECCCEECCCCEEEEECCCCEEEEECCEEEEEEECC
GDYDIESEIIPFLSTLKGFKFGFNSGMRAEVLFVNTKEFTVKWGTKNAINIPAAGLPGGM
CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEEEECCCCCEECCCCCCCCCC
PIRANGRFNFKVNDYVALIDKIAGVKDQYVVEDIKIRITSILDQLLMKWITKEGKDMFNL
EEEECCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
QANAFDIAKGIKEDLDMEIVGDGMTITGFNIMSFNYPKEVQDMITKNASHGMVGDLNRYQ
CCCHHHHHHHHHHHCCEEEECCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCHHE
QISMTDGMASGKMTGGGAASDMAGMMMGMNVANQMMNQMNQNQQAQTQTPPSAPQPAAKP
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCC
NFCPNCGTKTGEANFCPNCGQKLV
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]