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The map label for this gene is pspA [H]

Identifier: 52784443

GI number: 52784443

Start: 643085

End: 643765

Strand: Direct

Name: pspA [H]

Synonym: BLi00640

Alternate gene names: 52784443

Gene position: 643085-643765 (Clockwise)

Preceding gene: 52784441

Following gene: 52784444

Centisome position: 15.23

GC content: 48.46

Gene sequence:

>681_bases
ATGAGTATATTAAGCAGGTTCAAAGACATTATGGCCAGCAATATTAACGCTTTGCTGGATAAAGCGGAGAACACGGAAAA
AATGGTGGATCAGTATGTCAGGAACTTAAACAGCGACTTAAACAAAGTAAAGGCGGAAACGGCGTCCGTCATGGCGGCCG
AGCAAAGGGCAAAAAGAGAACTGGCGGATTGCCGGGCGGAAATCGACAAGCTTGAGCGCTATGCAATGAAGGCTTTGGAA
GCCGGCAGCGAGGCGGATGCCCGAACATTTTTAGAAAAGAAAGCGGTGCTTGAAACGAAGGCATCCGAGTTAGAAACTGC
GTTTCAAACGGCGTCATCCAATGCGAATCAAATGAAAAAAATGCACGATAAGCTCGTTTCCGATATCGGGGAGCTTGAAG
CACGCCGCGCCGCGATCAAAGCGAAATGGACAGCGGCGAAAACACAGGAAAGAATGAATAAACTCGGTGCATCTGCAGCG
AATGCCAACCATTCAATGTCCGCTTTCGGCAGAATGGAAGAAAAGGCAAACCGGGCGCTTGATGAAGCGAATGCGATGGC
TGAATTGAACGCCGCTCCTCAAGATGACATAGAAGACCTGAAGGCTAAATATGACAGCCCTTCTAATGTGGATGATGCGC
TTGCCGCATTGAAAGCGAAAATGGCGGGTCAAAAGTCATAG

Upstream 100 bases:

>100_bases
CTGCCATTATATCAATTTTTTATTAAAAAACCGAAACTTTTCCTCTGGAAAATAGTATATTTAAACTAAGTATATTTTAC
TATAAGGAGGAATTTCTTAG

Downstream 100 bases:

>100_bases
CATTTGAAATGAATAAAGTGAGAGGTTAAGAGACATGGTAATTTCTTATAAATGTCCGGGCTGCGGGGATGACATGGCCT
TTGACGCTGAATCGGGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSILSRFKDIMASNINALLDKAENTEKMVDQYVRNLNSDLNKVKAETASVMAAEQRAKRELADCRAEIDKLERYAMKALE
AGSEADARTFLEKKAVLETKASELETAFQTASSNANQMKKMHDKLVSDIGELEARRAAIKAKWTAAKTQERMNKLGASAA
NANHSMSAFGRMEEKANRALDEANAMAELNAAPQDDIEDLKAKYDSPSNVDDALAALKAKMAGQKS

Sequences:

>Translated_226_residues
MSILSRFKDIMASNINALLDKAENTEKMVDQYVRNLNSDLNKVKAETASVMAAEQRAKRELADCRAEIDKLERYAMKALE
AGSEADARTFLEKKAVLETKASELETAFQTASSNANQMKKMHDKLVSDIGELEARRAAIKAKWTAAKTQERMNKLGASAA
NANHSMSAFGRMEEKANRALDEANAMAELNAAPQDDIEDLKAKYDSPSNVDDALAALKAKMAGQKS
>Mature_225_residues
SILSRFKDIMASNINALLDKAENTEKMVDQYVRNLNSDLNKVKAETASVMAAEQRAKRELADCRAEIDKLERYAMKALEA
GSEADARTFLEKKAVLETKASELETAFQTASSNANQMKKMHDKLVSDIGELEARRAAIKAKWTAAKTQERMNKLGASAAN
ANHSMSAFGRMEEKANRALDEANAMAELNAAPQDDIEDLKAKYDSPSNVDDALAALKAKMAGQKS

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspa Has A Role As A Negative Regulator, Is Required For Efficient Translocation And Has An Unknown Fu

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 24791; Mature: 24660

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILSRFKDIMASNINALLDKAENTEKMVDQYVRNLNSDLNKVKAETASVMAAEQRAKRE
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADCRAEIDKLERYAMKALEAGSEADARTFLEKKAVLETKASELETAFQTASSNANQMKK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MHDKLVSDIGELEARRAAIKAKWTAAKTQERMNKLGASAANANHSMSAFGRMEEKANRAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHH
DEANAMAELNAAPQDDIEDLKAKYDSPSNVDDALAALKAKMAGQKS
HHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SILSRFKDIMASNINALLDKAENTEKMVDQYVRNLNSDLNKVKAETASVMAAEQRAKRE
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADCRAEIDKLERYAMKALEAGSEADARTFLEKKAVLETKASELETAFQTASSNANQMKK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MHDKLVSDIGELEARRAAIKAKWTAAKTQERMNKLGASAANANHSMSAFGRMEEKANRAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHH
DEANAMAELNAAPQDDIEDLKAKYDSPSNVDDALAALKAKMAGQKS
HHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377; 8755892 [H]