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The map label for this gene is ytfH [C]

Identifier: 52784398

GI number: 52784398

Start: 583173

End: 583508

Strand: Direct

Name: ytfH [C]

Synonym: BLi00585

Alternate gene names: 52784398

Gene position: 583173-583508 (Clockwise)

Preceding gene: 52784396

Following gene: 52784399

Centisome position: 13.81

GC content: 38.1

Gene sequence:

>336_bases
ATGAGTATGGCAGAATATAAAGGTAAAGTGAAAAATATTCAAGATACACCTTTTGGATACACATTGTCTGTTATCGGCGG
TAAATGGAAAATGGTTATTATTTACCTCCTGGCAGAAAATCAACCAATTCGCTTCAATGAGTTGAAAAGACAAATAGGGG
CTATTACTTATAAAACATTGAGTTCACAACTTAAAGAATTGGAAGCGGATGGACTGGTGAAACGGAAAGAGTACCCTCAA
GTTCCCCCTAAGGTCGAGTACAGTCTCACGGATAAAGCGGAATCCCTATTGCCGGTTTTAGAAGGGTTATGTGAATGGGG
TTTAAAAAACCAATAA

Upstream 100 bases:

>100_bases
AGTCTCCTTTACTTCAAAGTAAGGTTAGTATAAAATGAACGCAAATAAAAAAATAGTACGCACTTTAATGACAGGTACTA
TCCAAAAGGAGAGTGTAAAA

Downstream 100 bases:

>100_bases
AGTTAAGGTTTCATTCTTACTGGAGAGGGAAGAATCAAAAAGCTTCGTTCTATTGCCAACAATCCTTTTGTTTGTCTGGA
AATGTCAATATAGATTAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSMAEYKGKVKNIQDTPFGYTLSVIGGKWKMVIIYLLAENQPIRFNELKRQIGAITYKTLSSQLKELEADGLVKRKEYPQ
VPPKVEYSLTDKAESLLPVLEGLCEWGLKNQ

Sequences:

>Translated_111_residues
MSMAEYKGKVKNIQDTPFGYTLSVIGGKWKMVIIYLLAENQPIRFNELKRQIGAITYKTLSSQLKELEADGLVKRKEYPQ
VPPKVEYSLTDKAESLLPVLEGLCEWGLKNQ
>Mature_110_residues
SMAEYKGKVKNIQDTPFGYTLSVIGGKWKMVIIYLLAENQPIRFNELKRQIGAITYKTLSSQLKELEADGLVKRKEYPQV
PPKVEYSLTDKAESLLPVLEGLCEWGLKNQ

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=93, Percent_Identity=36.5591397849462, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 12650; Mature: 12519

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS51118 HTH_HXLR ; PS00392 DDC_GAD_HDC_YDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMAEYKGKVKNIQDTPFGYTLSVIGGKWKMVIIYLLAENQPIRFNELKRQIGAITYKTL
CCCHHHCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
SSQLKELEADGLVKRKEYPQVPPKVEYSLTDKAESLLPVLEGLCEWGLKNQ
HHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SMAEYKGKVKNIQDTPFGYTLSVIGGKWKMVIIYLLAENQPIRFNELKRQIGAITYKTL
CCHHHCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
SSQLKELEADGLVKRKEYPQVPPKVEYSLTDKAESLLPVLEGLCEWGLKNQ
HHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10086842; 11058132 [H]