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The map label for this gene is rsbV [H]

Identifier: 52784378

GI number: 52784378

Start: 562619

End: 562945

Strand: Direct

Name: rsbV [H]

Synonym: BLi00558

Alternate gene names: 52784378

Gene position: 562619-562945 (Clockwise)

Preceding gene: 52784377

Following gene: 52784379

Centisome position: 13.32

GC content: 43.12

Gene sequence:

>327_bases
GTGAATTTGGCAGTTGATACGAATAAAAATGACCATGTGATAGAAGTAAAAGTTGCGGGCGAAATTGACGTGCACACGGC
TCCAACACTGCGGGATGAGCTGATGCCGCTCGCGGAAGAAGGAAAAGATCTCAAAGTTAGTCTGAAAGACGTTTCATATA
TGGACAGCACAGGGCTGGGTGTATTCGTCGGCATTTACAAAGCGGTAAACAGAACTGGGGGTTCTTTAGTGCTTGAAAAT
CTGTCAGAGCGTTTGATTCGTTTGTTTGATATTACAGGTTTAAAGGACATCATTGACATTTCTGGAAAGTCAGAGGGTGG
ATTATAA

Upstream 100 bases:

>100_bases
CATGATGATTTTACTCTCATTGTTTTAAAAAGAAAGGTTTAAAGCTTCTCTTCGCTGGGTAATAAACCAGTAGCTCATTA
AGAGAACCAGAGGTGATATT

Downstream 100 bases:

>100_bases
TGAAGAGAGCAGCTGATTACATTGAAATGAAGTCACCTGCCAAACCAGAATACGTAGGAATCATTCGTTTAACCCTGTCG
GGGATTGCAAGCAAGATGGG

Product: RsbV

Products: NA

Alternate protein names: Anti-anti-sigma-B factor [H]

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MNLAVDTNKNDHVIEVKVAGEIDVHTAPTLRDELMPLAEEGKDLKVSLKDVSYMDSTGLGVFVGIYKAVNRTGGSLVLEN
LSERLIRLFDITGLKDIIDISGKSEGGL

Sequences:

>Translated_108_residues
MNLAVDTNKNDHVIEVKVAGEIDVHTAPTLRDELMPLAEEGKDLKVSLKDVSYMDSTGLGVFVGIYKAVNRTGGSLVLEN
LSERLIRLFDITGLKDIIDISGKSEGGL
>Mature_108_residues
MNLAVDTNKNDHVIEVKVAGEIDVHTAPTLRDELMPLAEEGKDLKVSLKDVSYMDSTGLGVFVGIYKAVNRTGGSLVLEN
LSERLIRLFDITGLKDIIDISGKSEGGL

Specific function: Positive regulator of sigma-B activity. Non- phosphorylated rsbV binds to rsbW, preventing its association with sigma-B. When phosphorylated, releases rsbW, which is then free to complex with and inactivate sigma-B [H]

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003658
- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 11685; Mature: 11685

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLAVDTNKNDHVIEVKVAGEIDVHTAPTLRDELMPLAEEGKDLKVSLKDVSYMDSTGLG
CCEECCCCCCCCEEEEEECCEEECCCCCCHHHHHCCHHHCCCCEEEEECCCCCCCCCCCH
VFVGIYKAVNRTGGSLVLENLSERLIRLFDITGLKDIIDISGKSEGGL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MNLAVDTNKNDHVIEVKVAGEIDVHTAPTLRDELMPLAEEGKDLKVSLKDVSYMDSTGLG
CCEECCCCCCCCEEEEEECCEEECCCCCCHHHHHCCHHHCCCCEEEEECCCCCCCCCCCH
VFVGIYKAVNRTGGSLVLENLSERLIRLFDITGLKDIIDISGKSEGGL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9661670 [H]