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The map label for this gene is ydbK [H]

Identifier: 52784358

GI number: 52784358

Start: 544754

End: 545521

Strand: Direct

Name: ydbK [H]

Synonym: BLi00538

Alternate gene names: 52784358

Gene position: 544754-545521 (Clockwise)

Preceding gene: 52784357

Following gene: 52784359

Centisome position: 12.9

GC content: 44.79

Gene sequence:

>768_bases
ATGTTTAAACTGATTCAAAACGAGCATGTTAAATTGCTGAAGCGCAAAGTAACATTTGTATCGCTGGCGCTGATTGTAGT
CTTTCAATTTCTCCTCGCGCTCATCACCAAAAGAATCCTGATGGGCGCCGGGGCAGAGGATCATTTTATCGGCTATTTTT
CATTCACCCCAAACCTGAATATCCTCTTGCAGGGGCTTTCGATTGTGGTGGCGGCTTCAATTATATCCTTTGAATATGAT
AAAAAGACGATCAAGTTTTTGCTGATCCGCCCTGTCAGAAGAGAAAAGATTCTCGTTTCTAAATACGTGACGAGCGTGCT
CGCAAGCATTTGGCTTTTTATTATTTACTACGGATTTTCTATATTGTTCGGCCTGCTCTTTTTCGGCGTGAAGCTCGACG
AAAAAGCGGAGCCGCTCTTTATCAATACGGTGAAAATGATCGGGACGCAGTGGTTTGAAGTATGGATGATGGTTTCATTT
GCGTTTTTATGCTCGGCATTATTCAAAAGCAGCGCGCTCAGCATCATGGTGTCGATTGTCGTGCTGTACGGCGCCAAAAT
GCTTGTGACGATTATGGCGTATTTGGAAAAGCCGCTCGGCAAGTTTTTATTGTTCGCCAATACCGATTTAACGCAGTACG
CCGGAGAGGCAAAGCCGCTTTTTGCCGGGATGACGCCTTTATTCTCGCTCTTCATCGTCTTTATCCATCTCGTGTTTTTT
CTCGGAACGGCATGGTGGGGCTTTTGCAAACGCGATATGAAGGTATAA

Upstream 100 bases:

>100_bases
GTCGCCAATGATATTGACGTCTATTCGATCGCTCCGTTTAAGCAGTCTCTTGAGGATGAATATATGGCGCGGACGAATGG
AATAGAAGAGAGGAATGCTG

Downstream 100 bases:

>100_bases
ATAATTGTCCAAAGTGTGACAAAAGGAATGACATTTTTGTGAAATATGTCGTAATTACCGTGTGAATCTCCTATTCTCAA
TTATAATTTTAGGAAGGGAA

Product: YdbK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MFKLIQNEHVKLLKRKVTFVSLALIVVFQFLLALITKRILMGAGAEDHFIGYFSFTPNLNILLQGLSIVVAASIISFEYD
KKTIKFLLIRPVRREKILVSKYVTSVLASIWLFIIYYGFSILFGLLFFGVKLDEKAEPLFINTVKMIGTQWFEVWMMVSF
AFLCSALFKSSALSIMVSIVVLYGAKMLVTIMAYLEKPLGKFLLFANTDLTQYAGEAKPLFAGMTPLFSLFIVFIHLVFF
LGTAWWGFCKRDMKV

Sequences:

>Translated_255_residues
MFKLIQNEHVKLLKRKVTFVSLALIVVFQFLLALITKRILMGAGAEDHFIGYFSFTPNLNILLQGLSIVVAASIISFEYD
KKTIKFLLIRPVRREKILVSKYVTSVLASIWLFIIYYGFSILFGLLFFGVKLDEKAEPLFINTVKMIGTQWFEVWMMVSF
AFLCSALFKSSALSIMVSIVVLYGAKMLVTIMAYLEKPLGKFLLFANTDLTQYAGEAKPLFAGMTPLFSLFIVFIHLVFF
LGTAWWGFCKRDMKV
>Mature_255_residues
MFKLIQNEHVKLLKRKVTFVSLALIVVFQFLLALITKRILMGAGAEDHFIGYFSFTPNLNILLQGLSIVVAASIISFEYD
KKTIKFLLIRPVRREKILVSKYVTSVLASIWLFIIYYGFSILFGLLFFGVKLDEKAEPLFINTVKMIGTQWFEVWMMVSF
AFLCSALFKSSALSIMVSIVVLYGAKMLVTIMAYLEKPLGKFLLFANTDLTQYAGEAKPLFAGMTPLFSLFIVFIHLVFF
LGTAWWGFCKRDMKV

Specific function: Unknown

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29106; Mature: 29106

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]