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The map label for this gene is ydbA [H]

Identifier: 52784351

GI number: 52784351

Start: 537458

End: 538282

Strand: Direct

Name: ydbA [H]

Synonym: BLi00531

Alternate gene names: 52784351

Gene position: 537458-538282 (Clockwise)

Preceding gene: 52784349

Following gene: 52784353

Centisome position: 12.73

GC content: 46.55

Gene sequence:

>825_bases
GTGCGCTACGACAAAACAGATTTGGAAAACGAACTGAAAAAAATTGAAAAATGGGAAAAGGAACAGCAGAAAGCATGGTT
TTGGGAAAGGATCGGCCGGCTGCCGTTCAAAGTTCTGGACAAGCTTACGCCGGCATTCATTCAAGATAAAATCGGCCTGC
TGCTAGACGAAATCGGCGGCTTTATTCAAAATGGAGGCCAATATTTGACGTCCGAAAAGCATCTGATCCGCCAGTTTCAA
AAAAAGCTGCCGGATGAAACGATCGAAACGATTGAAGATATTCAATGGGCTCCTTTGGAAGTGATGGATCAAATATGTGA
AAATCTCGGGAAAAACAGGGCGAATACCGCAGCAGTCCAAGGAGCGACAACCGGTGTGGGCGGCTTGTTCACGCTTGCCG
TCGATATTCCCGCAATCCTCGGCCTTTCTTTAAAGACATTGCAGGACATCGCGGTATCTTACGGCTACGATCCTAAAGAA
AAAACGGAGCGGATGTTTATTATTAAATGTCTGCAGCTCAGCGCTGCTGATATTGTCGGGAAAAGGGCGATCATTCAGGA
ACTCAGCCGATACCATCAACCATCAGGCTCCCGTGAAAATATGATTTCGCAAATTCAAGGCTGGCGGGAAGTTGTTTATA
CATACCGCGATTCTTTCGGATGGAAAAAGCTGTTTCAAATGGTGCCAGTAGCAGGAATCCTTTTTGGTGCAATCTCAAAT
CGTTCGATGGTGAACGGTGTTGCCGAAACAGGGATGATGATGTATAAAAAGCGGCGCATCATGGAAAGGCTTGCGGAGCT
GGACGCGACAGAAACAGAGGGATAA

Upstream 100 bases:

>100_bases
TCATAAAGTTTTACCCGCTGGATGCCGATCAAAAAACACGGATTCATCAGATGAATCATTGTATACTATAAAAAAACACA
AATGAGAGGGCGAACCTTCC

Downstream 100 bases:

>100_bases
AAAGGCTGCCGTTTGATAACGGCAGCCTTTCTTATAGAGTTACGCTTTTTCTGTAAAGCGAGGCAGTCTGAAGATAATCG
CGCAAATGCCGCAGACGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRYDKTDLENELKKIEKWEKEQQKAWFWERIGRLPFKVLDKLTPAFIQDKIGLLLDEIGGFIQNGGQYLTSEKHLIRQFQ
KKLPDETIETIEDIQWAPLEVMDQICENLGKNRANTAAVQGATTGVGGLFTLAVDIPAILGLSLKTLQDIAVSYGYDPKE
KTERMFIIKCLQLSAADIVGKRAIIQELSRYHQPSGSRENMISQIQGWREVVYTYRDSFGWKKLFQMVPVAGILFGAISN
RSMVNGVAETGMMMYKKRRIMERLAELDATETEG

Sequences:

>Translated_274_residues
MRYDKTDLENELKKIEKWEKEQQKAWFWERIGRLPFKVLDKLTPAFIQDKIGLLLDEIGGFIQNGGQYLTSEKHLIRQFQ
KKLPDETIETIEDIQWAPLEVMDQICENLGKNRANTAAVQGATTGVGGLFTLAVDIPAILGLSLKTLQDIAVSYGYDPKE
KTERMFIIKCLQLSAADIVGKRAIIQELSRYHQPSGSRENMISQIQGWREVVYTYRDSFGWKKLFQMVPVAGILFGAISN
RSMVNGVAETGMMMYKKRRIMERLAELDATETEG
>Mature_274_residues
MRYDKTDLENELKKIEKWEKEQQKAWFWERIGRLPFKVLDKLTPAFIQDKIGLLLDEIGGFIQNGGQYLTSEKHLIRQFQ
KKLPDETIETIEDIQWAPLEVMDQICENLGKNRANTAAVQGATTGVGGLFTLAVDIPAILGLSLKTLQDIAVSYGYDPKE
KTERMFIIKCLQLSAADIVGKRAIIQELSRYHQPSGSRENMISQIQGWREVVYTYRDSFGWKKLFQMVPVAGILFGAISN
RSMVNGVAETGMMMYKKRRIMERLAELDATETEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31273; Mature: 31273

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRYDKTDLENELKKIEKWEKEQQKAWFWERIGRLPFKVLDKLTPAFIQDKIGLLLDEIGG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FIQNGGQYLTSEKHLIRQFQKKLPDETIETIEDIQWAPLEVMDQICENLGKNRANTAAVQ
HHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHC
GATTGVGGLFTLAVDIPAILGLSLKTLQDIAVSYGYDPKEKTERMFIIKCLQLSAADIVG
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
KRAIIQELSRYHQPSGSRENMISQIQGWREVVYTYRDSFGWKKLFQMVPVAGILFGAISN
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
RSMVNGVAETGMMMYKKRRIMERLAELDATETEG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]