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The map label for this gene is alsB [H]

Identifier: 52784259

GI number: 52784259

Start: 435240

End: 436232

Strand: Direct

Name: alsB [H]

Synonym: BLi00439

Alternate gene names: 52784259

Gene position: 435240-436232 (Clockwise)

Preceding gene: 52784249

Following gene: 52784260

Centisome position: 10.31

GC content: 49.75

Gene sequence:

>993_bases
ATGAAGAAGCTGTTAGTTGTTTATGCCGTGATGCTCTGTTTGTTTTTTCTGTATGTCTACGACTACTCCCGGGGCGATAA
AGCCGGTTCTGCAGAAGAAAGCAGGAGGCCTGCGGCCGCAGGCAGTCTGTCCGAAAAATACGTGATGGTCACGTTTCAAT
CGGGAATCGAATATTGGAAGAGCGGTCTGAAAGGCTTTGAGGATGCCGCGCAGCTTTTCAACGTCTCTGTCGAGTATCGG
GGGGCGGCCCATTATGATGTCCATGAGCAAACGACCGTCCTCGAGCAGGTGATTGCAAAAAAACCGGCGGGAATCGCTGT
TTCGGCAATAAACCCAAAAGCTTTAAACCCTGTCATCGACAAGGCGCACGAGCAGGGTATTCCGATCGTTTTATTTGATT
CAGACGCCCCGCTCAGCAAAGCTTCTACATATATCGGCACAAATAATATGGAAGCGGGTGCTGTGGCCGCAAGGCGAATG
GCCGAATTTTTGAATGGAAAGGGAGAAACCGCGGTCATTACCCAGCCGCAGCAGTACAATCATCAGGAAAGGACGAAGGG
CTTTGAACAAACGATCAAGCAAAAATACCCGAACATGAAGGTTGCCGCGGTTTTGGACGGAAAAGGGGATGAGCTGACGT
CGAAAAAAGAAGCGGCGAAGATTTTGGAGGAAAATCCGTCCATCAAAGGAATTTTCACGACTGAAGCCAATGGAGCGAGC
GGCGTGGCCCGTGCTGTGAAGGAGGCGGGACTTGAAGGGGAAGTATGTATCATCGGCTTTGATAAAGACAAGAAAACGCT
GGACGGCATCAAAAACGGATCGATTTCCGCGACAATGAGCCAGGACACATGGCAAATGGGCTATTGGTCGCTGCACATGC
TGTTTTTCTCAAATCACCATCTGAAGCATGAACGCCCGCTTCCGGCCGCAATCGACACAGGCATTACCATCATAACGAAA
GAAAATGTGGCAGCCTATTATGCGAATGATTAA

Upstream 100 bases:

>100_bases
CTGTCAGGATGCTCAGCTGGGTTCTTAGAAAAAAATGCGGCTAAATATATATTTATAGATTGTAAACGCTGTCTTGTCCT
CGACCAACAGGGGGATGAAG

Downstream 100 bases:

>100_bases
ACGTTTGATCAATAATGCGCCGATCCGTCATAAGCTGATCAGCCTTCTCTTGTTAATCAGCATGCTGCCGACGATCGGCC
TGGGCATTTTATCGGGATGG

Product: hypothetical protein

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: ALBP [H]

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKKLLVVYAVMLCLFFLYVYDYSRGDKAGSAEESRRPAAAGSLSEKYVMVTFQSGIEYWKSGLKGFEDAAQLFNVSVEYR
GAAHYDVHEQTTVLEQVIAKKPAGIAVSAINPKALNPVIDKAHEQGIPIVLFDSDAPLSKASTYIGTNNMEAGAVAARRM
AEFLNGKGETAVITQPQQYNHQERTKGFEQTIKQKYPNMKVAAVLDGKGDELTSKKEAAKILEENPSIKGIFTTEANGAS
GVARAVKEAGLEGEVCIIGFDKDKKTLDGIKNGSISATMSQDTWQMGYWSLHMLFFSNHHLKHERPLPAAIDTGITIITK
ENVAAYYAND

Sequences:

>Translated_330_residues
MKKLLVVYAVMLCLFFLYVYDYSRGDKAGSAEESRRPAAAGSLSEKYVMVTFQSGIEYWKSGLKGFEDAAQLFNVSVEYR
GAAHYDVHEQTTVLEQVIAKKPAGIAVSAINPKALNPVIDKAHEQGIPIVLFDSDAPLSKASTYIGTNNMEAGAVAARRM
AEFLNGKGETAVITQPQQYNHQERTKGFEQTIKQKYPNMKVAAVLDGKGDELTSKKEAAKILEENPSIKGIFTTEANGAS
GVARAVKEAGLEGEVCIIGFDKDKKTLDGIKNGSISATMSQDTWQMGYWSLHMLFFSNHHLKHERPLPAAIDTGITIITK
ENVAAYYAND
>Mature_330_residues
MKKLLVVYAVMLCLFFLYVYDYSRGDKAGSAEESRRPAAAGSLSEKYVMVTFQSGIEYWKSGLKGFEDAAQLFNVSVEYR
GAAHYDVHEQTTVLEQVIAKKPAGIAVSAINPKALNPVIDKAHEQGIPIVLFDSDAPLSKASTYIGTNNMEAGAVAARRM
AEFLNGKGETAVITQPQQYNHQERTKGFEQTIKQKYPNMKVAAVLDGKGDELTSKKEAAKILEENPSIKGIFTTEANGAS
GVARAVKEAGLEGEVCIIGFDKDKKTLDGIKNGSISATMSQDTWQMGYWSLHMLFFSNHHLKHERPLPAAIDTGITIITK
ENVAAYYAND

Specific function: Part of the binding-protein-dependent transport system AlsBAC for D-allose [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790526, Length=247, Percent_Identity=26.7206477732794, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 36126; Mature: 36126

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLVVYAVMLCLFFLYVYDYSRGDKAGSAEESRRPAAAGSLSEKYVMVTFQSGIEYWK
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEHHHHHHHH
SGLKGFEDAAQLFNVSVEYRGAAHYDVHEQTTVLEQVIAKKPAGIAVSAINPKALNPVID
HHHCCHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHCCHHHH
KAHEQGIPIVLFDSDAPLSKASTYIGTNNMEAGAVAARRMAEFLNGKGETAVITQPQQYN
HHHHCCCCEEEECCCCCHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHCC
HQERTKGFEQTIKQKYPNMKVAAVLDGKGDELTSKKEAAKILEENPSIKGIFTTEANGAS
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCHH
GVARAVKEAGLEGEVCIIGFDKDKKTLDGIKNGSISATMSQDTWQMGYWSLHMLFFSNHH
HHHHHHHHCCCCCCEEEEEECCCCHHHHCCCCCCEEEEECCCCHHHHHHEEEEEHHCCCC
LKHERPLPAAIDTGITIITKENVAAYYAND
CCCCCCCCHHHHCCEEEEEECCEEEEEECC
>Mature Secondary Structure
MKKLLVVYAVMLCLFFLYVYDYSRGDKAGSAEESRRPAAAGSLSEKYVMVTFQSGIEYWK
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEHHHHHHHH
SGLKGFEDAAQLFNVSVEYRGAAHYDVHEQTTVLEQVIAKKPAGIAVSAINPKALNPVID
HHHCCHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHCCHHHH
KAHEQGIPIVLFDSDAPLSKASTYIGTNNMEAGAVAARRMAEFLNGKGETAVITQPQQYN
HHHHCCCCEEEECCCCCHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHCC
HQERTKGFEQTIKQKYPNMKVAAVLDGKGDELTSKKEAAKILEENPSIKGIFTTEANGAS
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCHH
GVARAVKEAGLEGEVCIIGFDKDKKTLDGIKNGSISATMSQDTWQMGYWSLHMLFFSNHH
HHHHHHHHCCCCCCEEEEEECCCCHHHHCCCCCCEEEEECCCCHHHHHHEEEEEHHCCCC
LKHERPLPAAIDTGITIITKENVAAYYAND
CCCCCCCCHHHHCCEEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 8576032; 9401019; 10064713 [H]