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The map label for this gene is ycbO [H]

Identifier: 52784117

GI number: 52784117

Start: 268756

End: 269439

Strand: Direct

Name: ycbO [H]

Synonym: BLi00294

Alternate gene names: 52784117

Gene position: 268756-269439 (Clockwise)

Preceding gene: 52784116

Following gene: 52784118

Centisome position: 6.36

GC content: 42.11

Gene sequence:

>684_bases
TTGCTGAATTTGATGAGAATTGAAATGAAAAAGCTGAAGCTGGGATGGTATATACGCGGAGCCGTCTTTGCCAATTTCAT
CATTTTTGGTTTTCTGTGGATGGTGACCTGCACAGAAGGCAAGGAGACGTTCCAAACGATTGATGAAACTTTTCTATTGA
TCGGCACTTTTGTTAGAGCCGTTTTTATCGTATTCGGCGCTGTGCTGATCTCAAAATTAGTGATTTCAGAGTTTAAAAAC
AAGACAATACTGGTGATGTTCACGTATCCGATCAATCGAAAGAAACTGCTGGCTGCTAAACTGCTGATCGCAGGCGGGCT
GACCTTCGTTACGATATTGATATCAAACGCATGCGTTGCAGTTGGTTTTTTTCTGCTGAACTCAATCTATGGGATCATCC
CCGGCGAATTAACAGCTTCTATCGCGTCTCAGCAGGCTCTGAAAATGATCGTTTTTGCTTTTGGCGCCGCAGGAACGAGT
TTAGTACCCATCTTTTTTGGAATGAGAAAGTACTCCACTGCGGCAACGATCATCTCATCTGTTGTAATCATCATGCCGAT
CAGTTCCACAGGCCCTGGCTTTTCTATTTCTTCAATTGTGTATATACCTTTATCTCTTGCCGCAGTCGGTCTGTTTTTTT
CCTTTTTGGCTGTAAGGCGTATTGAAAAAATAGATGTTTTTTAA

Upstream 100 bases:

>100_bases
TAGAAATTGAATCCATGAATAAAAAGCATACTTCGCTTGAGGACTACTTCCTCAGCTTAATCAACGGCAATGCGGTCAAC
GCATAAGGAGGCGGAGAAAT

Downstream 100 bases:

>100_bases
CGGAGTTGAAGTTCAATGCTGAATTTAATTAAATTGGAGTTTAAAAAAACAAAATTAGGGTGGTATTACAAAGGTGCAGT
AATTGCAAATCTATGTATTC

Product: YcbO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MLNLMRIEMKKLKLGWYIRGAVFANFIIFGFLWMVTCTEGKETFQTIDETFLLIGTFVRAVFIVFGAVLISKLVISEFKN
KTILVMFTYPINRKKLLAAKLLIAGGLTFVTILISNACVAVGFFLLNSIYGIIPGELTASIASQQALKMIVFAFGAAGTS
LVPIFFGMRKYSTAATIISSVVIIMPISSTGPGFSISSIVYIPLSLAAVGLFFSFLAVRRIEKIDVF

Sequences:

>Translated_227_residues
MLNLMRIEMKKLKLGWYIRGAVFANFIIFGFLWMVTCTEGKETFQTIDETFLLIGTFVRAVFIVFGAVLISKLVISEFKN
KTILVMFTYPINRKKLLAAKLLIAGGLTFVTILISNACVAVGFFLLNSIYGIIPGELTASIASQQALKMIVFAFGAAGTS
LVPIFFGMRKYSTAATIISSVVIIMPISSTGPGFSISSIVYIPLSLAAVGLFFSFLAVRRIEKIDVF
>Mature_227_residues
MLNLMRIEMKKLKLGWYIRGAVFANFIIFGFLWMVTCTEGKETFQTIDETFLLIGTFVRAVFIVFGAVLISKLVISEFKN
KTILVMFTYPINRKKLLAAKLLIAGGLTFVTILISNACVAVGFFLLNSIYGIIPGELTASIASQQALKMIVFAFGAAGTS
LVPIFFGMRKYSTAATIISSVVIIMPISSTGPGFSISSIVYIPLSLAAVGLFFSFLAVRRIEKIDVF

Specific function: Unknown

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24888; Mature: 24888

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLMRIEMKKLKLGWYIRGAVFANFIIFGFLWMVTCTEGKETFQTIDETFLLIGTFVRA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VFIVFGAVLISKLVISEFKNKTILVMFTYPINRKKLLAAKLLIAGGLTFVTILISNACVA
HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGFFLLNSIYGIIPGELTASIASQQALKMIVFAFGAAGTSLVPIFFGMRKYSTAATIISS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VVIIMPISSTGPGFSISSIVYIPLSLAAVGLFFSFLAVRRIEKIDVF
HHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNLMRIEMKKLKLGWYIRGAVFANFIIFGFLWMVTCTEGKETFQTIDETFLLIGTFVRA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VFIVFGAVLISKLVISEFKNKTILVMFTYPINRKKLLAAKLLIAGGLTFVTILISNACVA
HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGFFLLNSIYGIIPGELTASIASQQALKMIVFAFGAAGTSLVPIFFGMRKYSTAATIISS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VVIIMPISSTGPGFSISSIVYIPLSLAAVGLFFSFLAVRRIEKIDVF
HHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377; 10568751 [H]