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The map label for this gene is yubF [H]

Identifier: 52784071

GI number: 52784071

Start: 224030

End: 224290

Strand: Direct

Name: yubF [H]

Synonym: BLi00246

Alternate gene names: 52784071

Gene position: 224030-224290 (Clockwise)

Preceding gene: 52784070

Following gene: 52784079

Centisome position: 5.31

GC content: 43.68

Gene sequence:

>261_bases
ATGCATAAATACAGAAGAAGAAACACAACGGCCTTTACGGTTATGTCATATTTCACATTTTTCGCGGGAGTCTTTTTATT
TGGTATCGGGCTATACAATGCGGACAATCTGCAGCTCAATGAAAAAGGCTATTACATAGCCGTGATGATTTTAGTGGCGG
TCGGCGCGATTTTGACCCAGAAAGTGACGAGAGACAATGCCGAGGACAATGAAATCATTGCGGAGCAGGAGAGAAGACAG
AATTTGTCTAGCGGCGAGTAA

Upstream 100 bases:

>100_bases
GGTGTTACATATTTACTAAATTGCGAGAAAAAAGGAAGAGAATTCTTCTTCTGGAGACGTAAATCAAGTATAATGGTTTT
ATTCTTTAGGAGGTATTAAG

Downstream 100 bases:

>100_bases
GCATAAAAAAAGCATCTTTAGGGATGCTTTTTTTTAATTTGAAATACTTTTATATTTATTTTCCAAAACGAAATCAATCA
TTCCAATAATTTTTGTATGG

Product: YubF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MHKYRRRNTTAFTVMSYFTFFAGVFLFGIGLYNADNLQLNEKGYYIAVMILVAVGAILTQKVTRDNAEDNEIIAEQERRQ
NLSSGE

Sequences:

>Translated_86_residues
MHKYRRRNTTAFTVMSYFTFFAGVFLFGIGLYNADNLQLNEKGYYIAVMILVAVGAILTQKVTRDNAEDNEIIAEQERRQ
NLSSGE
>Mature_86_residues
MHKYRRRNTTAFTVMSYFTFFAGVFLFGIGLYNADNLQLNEKGYYIAVMILVAVGAILTQKVTRDNAEDNEIIAEQERRQ
NLSSGE

Specific function: Unknown

COG id: COG4682

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008024 [H]

Pfam domain/function: PF05360 YiaAB [H]

EC number: NA

Molecular weight: Translated: 9845; Mature: 9845

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKYRRRNTTAFTVMSYFTFFAGVFLFGIGLYNADNLQLNEKGYYIAVMILVAVGAILTQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHH
KVTRDNAEDNEIIAEQERRQNLSSGE
HHHCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHKYRRRNTTAFTVMSYFTFFAGVFLFGIGLYNADNLQLNEKGYYIAVMILVAVGAILTQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHH
KVTRDNAEDNEIIAEQERRQNLSSGE
HHHCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]